66 lines
3.4 KiB
Python
66 lines
3.4 KiB
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RMsnbase(RPackage):
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"""Base Functions and Classes for Mass Spectrometry and Proteomics.
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MSnbase provides infrastructure for manipulation, processing and
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visualisation of mass spectrometry and proteomics data, ranging from raw
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to quantitative and annotated data."""
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bioc = "MSnbase"
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version("2.26.0", commit="3e6268a86b93c474e37b21a9b8f564812202b2b6")
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version("2.24.0", commit="b96e0142c663c2cb01e92479816a503c46caa1a8")
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version("2.22.0", commit="4f6e5767eee91b2105781b494fcabcfed16eba2d")
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version("2.20.4", commit="c86ac8b341832f2b577f2153258c1abf064e6448")
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version("2.16.1", commit="4d88b4edd1af59474462b1b06ad0ec5831f3a878")
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version("2.10.1", commit="4d5899bc9c714f0b1a70cddd537cd4621b2b53b0")
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version("2.8.3", commit="ef883752c5e92d445647bc5b5d23d5df320db415")
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version("2.6.4", commit="46836860ce0281eef135303f2e2948303d67f68c")
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version("2.4.2", commit="c045d65daa730c7837852e6343a05cae9644ab5e")
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version("2.2.0", commit="d6e8fb7f106d05096fa9074da0f829ac8f02c197")
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depends_on("r@3.1:", type=("build", "run"))
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depends_on("r@3.5:", type=("build", "run"), when="@2.16.1:")
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depends_on("r-biocgenerics@0.7.1:", type=("build", "run"))
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depends_on("r-biobase@2.15.2:", type=("build", "run"))
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depends_on("r-mzr@2.7.6:", type=("build", "run"))
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depends_on("r-mzr@2.11.11:", type=("build", "run"), when="@2.4.2:")
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depends_on("r-mzr@2.13.6:", type=("build", "run"), when="@2.6.4:")
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depends_on("r-mzr@2.15.1:", type=("build", "run"), when="@2.8.3:")
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depends_on("r-mzr@2.17.3:", type=("build", "run"), when="@2.10.1:")
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depends_on("r-mzr@2.19.6:", type=("build", "run"), when="@2.16.1:")
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depends_on("r-mzr@2.29.3:", type=("build", "run"), when="@2.22.0:")
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depends_on("r-s4vectors", type=("build", "run"))
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depends_on("r-protgenerics@1.5.1:", type=("build", "run"))
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depends_on("r-protgenerics@1.19.3:", type=("build", "run"), when="@2.16.1:")
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depends_on("r-protgenerics@1.25.1:", type=("build", "run"), when="@2.20.4:")
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depends_on("r-protgenerics@1.27.2:", type=("build", "run"), when="@2.22.0:")
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depends_on("r-protgenerics@1.29.1:", type=("build", "run"), when="@2.24.0:")
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depends_on("r-mscoreutils", type=("build", "run"), when="@2.20.4:")
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depends_on("r-biocparallel", type=("build", "run"))
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depends_on("r-iranges", type=("build", "run"))
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depends_on("r-iranges@2.13.28:", type=("build", "run"), when="@2.6.4:")
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depends_on("r-plyr", type=("build", "run"))
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depends_on("r-vsn", type=("build", "run"))
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depends_on("r-affy", type=("build", "run"))
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depends_on("r-impute", type=("build", "run"))
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depends_on("r-pcamethods", type=("build", "run"))
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depends_on("r-maldiquant@1.16:", type=("build", "run"))
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depends_on("r-mzid@1.5.2:", type=("build", "run"))
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depends_on("r-digest", type=("build", "run"))
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depends_on("r-lattice", type=("build", "run"))
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depends_on("r-ggplot2", type=("build", "run"))
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depends_on("r-xml", type=("build", "run"))
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depends_on("r-scales", type=("build", "run"), when="@2.6.4:")
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depends_on("r-mass", type=("build", "run"), when="@2.6.4:")
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depends_on("r-rcpp", type=("build", "run"))
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depends_on("r-preprocesscore", type=("build", "run"), when="@:2.16.1")
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