27 lines
1.0 KiB
Python
27 lines
1.0 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class PyMxfold2(PythonPackage):
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"""MXfold2: RNA secondary structure prediction using deep
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learning with thermodynamic integration"""
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homepage = "https://github.com/keio-bioinformatics/mxfold2"
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url = "https://github.com/keio-bioinformatics/mxfold2/releases/download/v0.1.1/mxfold2-0.1.1.tar.gz"
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maintainers = ['dorton21']
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version('0.1.1', sha256='9f39c6ff4138212d1ad2639005f5c05ffb4df0f7e22f5e7ad49466a05aa047e5')
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depends_on('python@3.7:', type=('build', 'run'))
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depends_on('py-torch@1.7:~valgrind', type=('build', 'run'))
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depends_on('py-torchvision', type=('build', 'run'))
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depends_on('py-wheel@0.35.1:0.36.0', type=('build', 'run'))
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depends_on('py-setuptools', type='build')
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depends_on('py-setuptools-cpp', type='build')
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depends_on('cmake', type='build')
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