47 lines
2.5 KiB
Python
47 lines
2.5 KiB
Python
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack.package import *
|
|
|
|
|
|
class RIranges(RPackage):
|
|
"""Foundation of integer range manipulation in Bioconductor.
|
|
|
|
Provides efficient low-level and highly reusable S4 classes for storing,
|
|
manipulating and aggregating over annotated ranges of integers.
|
|
Implements an algebra of range operations, including efficient
|
|
algorithms for finding overlaps and nearest neighbors. Defines efficient
|
|
list-like classes for storing, transforming and aggregating large
|
|
grouped data, i.e., collections of atomic vectors and DataFrames."""
|
|
|
|
bioc = "IRanges"
|
|
|
|
version("2.30.0", commit="9b5f3ca12812fb76c23b1550aa3a794384384d9b")
|
|
version("2.28.0", commit="d85ee908a379e12d1e32599e999c71ab37c25e57")
|
|
version("2.24.1", commit="6c61fddf4c5830f69a0f7f108888c67cd0a12b19")
|
|
version("2.22.2", commit="8c5e991")
|
|
version("2.18.3", commit="c98a7ba074e72f2e5ec98252dffe9d3392711972")
|
|
version("2.16.0", commit="26834c6868d7c279dd8ac1bb9daa16e6fef273c2")
|
|
version("2.14.12", commit="00af02756c14771a23df9efcf379409ab6eb3041")
|
|
version("2.12.0", commit="1b1748655a8529ba87ad0f223f035ef0c08e7fcd")
|
|
version("2.10.5", commit="b00d1d5025e3c480d17c13100f0da5a0132b1614")
|
|
|
|
depends_on("r@3.1.0:", type=("build", "run"))
|
|
depends_on("r@4.0.0:", type=("build", "run"), when="@2.24.1:")
|
|
depends_on("r-biocgenerics@0.21.1:", type=("build", "run"))
|
|
depends_on("r-biocgenerics@0.23.3:", type=("build", "run"), when="@2.12.0:")
|
|
depends_on("r-biocgenerics@0.25.3:", type=("build", "run"), when="@2.14.12:")
|
|
depends_on("r-biocgenerics@0.36.0:", type=("build", "run"), when="@2.24.1:")
|
|
depends_on("r-biocgenerics@0.39.2:", type=("build", "run"), when="@2.28.0:")
|
|
depends_on("r-s4vectors@0.13.17:", type=("build", "run"))
|
|
depends_on("r-s4vectors@0.15.5:", type=("build", "run"), when="@2.12.0:")
|
|
depends_on("r-s4vectors@0.18.2:", type=("build", "run"), when="@2.14.12:")
|
|
depends_on("r-s4vectors@0.19.11:", type=("build", "run"), when="@2.16.0:")
|
|
depends_on("r-s4vectors@0.21.9:", type=("build", "run"), when="@2.18.3:")
|
|
depends_on("r-s4vectors@0.25.14:", type=("build", "run"), when="@2.22.2:")
|
|
depends_on("r-s4vectors@0.27.12:", type=("build", "run"), when="@2.24.1:")
|
|
depends_on("r-s4vectors@0.29.19:", type=("build", "run"), when="@2.28.0:")
|
|
depends_on("r-s4vectors@0.33.3:", type=("build", "run"), when="@2.30.0:")
|