41 lines
1.9 KiB
Python
41 lines
1.9 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RIranges(RPackage):
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"""Foundation of integer range manipulation in Bioconductor.
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Provides efficient low-level and highly reusable S4 classes for storing,
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manipulating and aggregating over annotated ranges of integers.
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Implements an algebra of range operations, including efficient
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algorithms for finding overlaps and nearest neighbors. Defines efficient
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list-like classes for storing, transforming and aggregating large
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grouped data, i.e., collections of atomic vectors and DataFrames."""
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homepage = "https://bioconductor.org/packages/IRanges"
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git = "https://git.bioconductor.org/packages/IRanges.git"
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version('2.18.3', commit='c98a7ba074e72f2e5ec98252dffe9d3392711972')
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version('2.16.0', commit='26834c6868d7c279dd8ac1bb9daa16e6fef273c2')
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version('2.14.12', commit='00af02756c14771a23df9efcf379409ab6eb3041')
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version('2.12.0', commit='1b1748655a8529ba87ad0f223f035ef0c08e7fcd')
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version('2.10.5', commit='b00d1d5025e3c480d17c13100f0da5a0132b1614')
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depends_on('r@3.1.0:', type=('build', 'run'))
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depends_on('r-biocgenerics@0.21.1:', type=('build', 'run'))
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depends_on('r-s4vectors@0.13.17:', type=('build', 'run'))
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depends_on('r-biocgenerics@0.23.3:', when='@2.12.0:', type=('build', 'run'))
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depends_on('r-s4vectors@0.15.5:', when='@2.12.0:', type=('build', 'run'))
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depends_on('r-biocgenerics@0.25.3:', when='@2.14.12:', type=('build', 'run'))
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depends_on('r-s4vectors@0.18.2:', when='@2.14.12:', type=('build', 'run'))
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depends_on('r-s4vectors@0.19.11:', when='@2.16.0:', type=('build', 'run'))
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depends_on('r-s4vectors@0.21.9:', when='@2.18.3:', type=('build', 'run'))
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