a8ccb8e116
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
35 lines
1.3 KiB
Python
35 lines
1.3 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Microbiomeutil(MakefilePackage, SourceforgePackage):
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"""Microbiome analysis utilities"""
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homepage = "http://microbiomeutil.sourceforge.net/"
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sourceforge_mirror_path = "microbiomeutil/microbiomeutil-r20110519.tgz"
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version('20110519', sha256='9233de80ea57bfb9e9371cbe7e3bfad2d4a51168fddaf60fa144c4046c80d823')
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depends_on('perl', type=('build', 'run'))
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depends_on('blast-plus')
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depends_on('cdbfasta')
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def install(self, spec, prefix):
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install_tree('ChimeraSlayer', prefix.ChimeraSlayer)
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install_tree('NAST-iEr', join_path(prefix, 'NAST-iEr'))
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install_tree('TreeChopper', prefix.TreeChopper)
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install_tree('WigeoN', prefix.WigeoN)
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install_tree('docs', prefix.docs)
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install_tree('RESOURCES', prefix.resources)
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install_tree('AmosCmp16Spipeline', prefix.AmosCmp16Spipeline)
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def setup_run_environment(self, env):
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env.prepend_path('PATH', self.prefix.ChimeraSlayer)
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env.prepend_path('PATH', join_path(self.prefix, 'NAST-iEr'))
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env.prepend_path('PATH', self.prefix.TreeChopper)
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env.prepend_path('PATH', self.prefix.WigeoN)
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