eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
190 lines
7.0 KiB
Python
190 lines
7.0 KiB
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Moab(AutotoolsPackage):
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"""MOAB is a component for representing and evaluating mesh
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data. MOAB can store structured and unstructured mesh, consisting
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of elements in the finite element 'zoo.' The functional interface
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to MOAB is simple yet powerful, allowing the representation of
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many types of metadata commonly found on the mesh. MOAB is
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optimized for efficiency in space and time, based on access to
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mesh in chunks rather than through individual entities, while also
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versatile enough to support individual entity access."""
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homepage = "https://bitbucket.org/fathomteam/moab"
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url = "http://ftp.mcs.anl.gov/pub/fathom/moab-5.0.0.tar.gz"
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version('5.0.0', '1840ca02366f4d3237d44af63e239e3b')
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version('4.9.2', '540931a604c180bbd3c1bb3ee8c51dd0')
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version('4.9.1', '19cc2189fa266181ad9109b18d0b2ab8')
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version('4.9.0', '40695d0a159040683cfa05586ad4a7c2')
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version('4.8.2', '1dddd10f162fce3cfffaedc48f6f467d')
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variant('mpi', default=True, description='enable mpi support')
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variant('hdf5', default=True,
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description='Required to enable the hdf5 (default I/O) format')
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variant('netcdf', default=False,
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description='Required to enable the ExodusII reader/writer.')
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variant('pnetcdf', default=False,
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description='Enable pnetcdf (AKA parallel-netcdf) support')
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variant('netcdf', default=False,
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description='Required to enable the ExodusII reader/writer.')
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variant('zoltan', default=False, description='Enable zoltan support')
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variant('cgm', default=False, description='Enable common geometric module')
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variant('metis', default=True, description='Enable metis link')
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variant('parmetis', default=True, description='Enable parmetis link')
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variant('irel', default=False, description='Enable irel interface')
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variant('fbigeom', default=False, description='Enable fbigeom interface')
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variant('coupler', default=True, description='Enable mbcoupler tool')
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variant('dagmc', default=False, description='Enable dagmc tool')
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variant("debug", default=False, description='enable debug symbols')
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variant('shared', default=False,
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description='Enables the build of shared libraries')
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variant('fortran', default=True, description='Enable Fortran support')
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conflicts('+irel', when='~cgm')
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conflicts('+pnetcdf', when='~mpi')
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conflicts('+parmetis', when='~mpi')
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conflicts('+coupler', when='~mpi')
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# There are many possible variants for MOAB. Here are examples for
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# two of them:
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#
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# variant('vtk', default=False, description='Enable VTK support')
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# variant('cgns', default=False, description='Enable CGNS support')
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# depends_on('cgns', when='+cgns')
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# depends_on('vtk', when='+vtk')
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depends_on('blas')
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depends_on('lapack')
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depends_on('mpi', when='+mpi')
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depends_on('hdf5', when='+hdf5')
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depends_on('hdf5+mpi', when='+hdf5+mpi')
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depends_on('netcdf', when='+netcdf')
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depends_on('parallel-netcdf', when='+pnetcdf')
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depends_on('cgm', when='+cgm')
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depends_on('metis', when='+metis')
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depends_on('parmetis', when='+parmetis')
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# FIXME it seems that zoltan needs to be built without fortran
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depends_on('zoltan~fortran', when='+zoltan')
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def configure_args(self):
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spec = self.spec
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options = [
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'--enable-optimize',
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'--disable-vtkMOABReader',
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'--disable-mbtagprop',
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'--disable-mbmem',
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'--disable-spheredecomp',
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'--disable-mbsurfplot',
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'--disable-gsets',
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'--disable-mcnpmit',
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'--disable-refiner',
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'--disable-h5mtools',
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'--disable-mbcslam',
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'--with-pic',
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'--without-vtk'
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]
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if '+mpi' in spec:
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options.extend([
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'--with-mpi=%s' % spec['mpi'].prefix,
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'CXX=%s' % spec['mpi'].mpicxx,
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'CC=%s' % spec['mpi'].mpicc,
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'FC=%s' % spec['mpi'].mpifc
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])
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if '+parmetis' in spec:
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options.append('--with-parmetis=%s' % spec['parmetis'].prefix)
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else:
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options.append('--without-parmetis')
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# FIXME: --without-mpi does not configure right
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# else:
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# options.append('--without-mpi')
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options.append('--with-blas=%s' % spec['blas'].libs.ld_flags)
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options.append('--with-lapack=%s' % spec['lapack'].libs.ld_flags)
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if '+hdf5' in spec:
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options.append('--with-hdf5=%s' % spec['hdf5'].prefix)
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else:
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options.append('--without-hdf5')
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if '+netcdf' in spec:
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options.append('--with-netcdf=%s' % spec['netcdf'].prefix)
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else:
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options.append('--without-netcdf')
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if '+pnetcdf' in spec:
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options.append('--with-pnetcdf=%s'
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% spec['parallel-netcdf'].prefix)
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else:
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options.append('--without-pnetcdf')
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if '+cgm' in spec:
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options.append('--with-cgm=%s' % spec['cgm'].prefix)
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if '+irel' in spec:
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options.append('--enable-irel')
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else:
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options.append('--disable-irel')
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else:
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options.append('--without-cgm')
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if '+fbigeom' in spec:
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options.append('--enable-fbigeom')
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else:
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options.append('--disable-fbigeom')
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if '+coupler' in spec:
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options.append('--enable-mbcoupler')
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else:
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options.append('--disable-mbcoupler')
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if '+dagmc' in spec:
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options.append('--enable-dagmc')
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else:
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options.append('--disable-dagmc')
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if '+metis' in spec:
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options.append('--with-metis=%s' % spec['metis'].prefix)
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else:
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options.append('--without-metis')
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if '+parmetis' in spec:
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options.append('--with-parmetis=%s' % spec['parmetis'].prefix)
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else:
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options.append('--without-parmetis')
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if '+zoltan' in spec:
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options.append('--with-zoltan=%s' % spec['zoltan'].prefix)
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else:
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options.append('--without-zoltan')
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if '+debug' in spec:
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options.append('--enable-debug')
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else:
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options.append('--disable-debug')
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# FIXME it seems that with cgm and shared, we have a link
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# issue in tools/geometry
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if '+shared' in spec:
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options.append('--enable-shared')
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else:
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options.append('--disable-shared')
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if '~fortran' in spec:
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options.append('--disable-fortran')
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else:
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options.append('--enable-fortran')
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return options
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# FIXME Run the install phase with -j 1. There seems to be a problem with
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# parallel installations of examples
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def install(self, spec, prefix):
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make('install', parallel=False)
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