62927654dd
We'd like to use a consistent checksum scheme everywhere so that we can:
a) incorporate archive checksums into our specs and have a
consistent hashing algorithm across all specs.
b) index mirrors with a consistent type of checksum, and not one that
is dependent on how spack packages are written.
- [x] convert existing md5, sha224, sha512, sha1 checksums to sha256
145 lines
6.6 KiB
Python
145 lines
6.6 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack import *
|
|
|
|
|
|
class SuiteSparse(Package):
|
|
"""
|
|
SuiteSparse is a suite of sparse matrix algorithms
|
|
"""
|
|
homepage = 'http://faculty.cse.tamu.edu/davis/suitesparse.html'
|
|
url = 'http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-5.2.0.tar.gz'
|
|
|
|
version('5.3.0', sha256='90e69713d8c454da5a95a839aea5d97d8d03d00cc1f667c4bdfca03f640f963d')
|
|
version('5.2.0', sha256='3c46c035ea8217649958a0f73360e825b0c9dcca4e32a9349d2c7678c0d48813')
|
|
version('5.1.0', sha256='1b1371074224c6844697f3a55024d185b7ff6ffa49ac141d433fbb1aadf426f5')
|
|
version('4.5.5', sha256='b9a98de0ddafe7659adffad8a58ca3911c1afa8b509355e7aa58b02feb35d9b6')
|
|
version('4.5.4', sha256='698b5c455645bb1ad29a185f0d52025f3bd7cb7261e182c8878b0eb60567a714')
|
|
version('4.5.3', sha256='6199a3a35fbce82b155fd2349cf81d2b7cddaf0dac218c08cb172f9bc143f37a')
|
|
version('4.5.1', sha256='ac4524b9f69c4f8c2652d720b146c92a414c1943f86d46df49b4ff8377ae8752')
|
|
|
|
variant('tbb', default=False, description='Build with Intel TBB')
|
|
variant('pic', default=True, description='Build position independent code (required to link with shared libraries)')
|
|
variant('cuda', default=False, description='Build with CUDA')
|
|
variant('openmp', default=False, description='Build with OpenMP')
|
|
|
|
depends_on('blas')
|
|
depends_on('lapack')
|
|
depends_on('cmake', when='@5.2.0:', type='build')
|
|
|
|
depends_on('metis@5.1.0', when='@4.5.1:')
|
|
# in @4.5.1. TBB support in SPQR seems to be broken as TBB-related linkng
|
|
# flags does not seem to be used, which leads to linking errors on Linux.
|
|
depends_on('tbb', when='@4.5.3:+tbb')
|
|
|
|
depends_on('cuda', when='+cuda')
|
|
|
|
patch('tbb_453.patch', when='@4.5.3:4.5.5+tbb')
|
|
|
|
# This patch removes unsupported flags for pgi compiler
|
|
patch('pgi.patch', when='%pgi')
|
|
|
|
# This patch adds '-lm' when linking libgraphblas and when using clang.
|
|
# Fixes 'libgraphblas.so.2.0.1: undefined reference to `__fpclassify''
|
|
patch('graphblas_libm_dep.patch', when='@5.2.0:5.2.99%clang')
|
|
|
|
conflicts('%gcc@:4.8', when='@5.2.0:', msg='gcc version must be at least 4.9 for suite-sparse@5.2.0:')
|
|
|
|
def install(self, spec, prefix):
|
|
# The build system of SuiteSparse is quite old-fashioned.
|
|
# It's basically a plain Makefile which include an header
|
|
# (SuiteSparse_config/SuiteSparse_config.mk)with a lot of convoluted
|
|
# logic in it. Any kind of customization will need to go through
|
|
# filtering of that file
|
|
|
|
pic_flag = self.compiler.pic_flag if '+pic' in spec else ''
|
|
|
|
make_args = [
|
|
'INSTALL=%s' % prefix,
|
|
# By default, the Makefile uses the Intel compilers if
|
|
# they are found. The AUTOCC flag disables this behavior,
|
|
# forcing it to use Spack's compiler wrappers.
|
|
'AUTOCC=no',
|
|
# CUDA=no does NOT disable cuda, it only disables internal search
|
|
# for CUDA_PATH. If in addition the latter is empty, then CUDA is
|
|
# completely disabled. See
|
|
# [SuiteSparse/SuiteSparse_config/SuiteSparse_config.mk] for more.
|
|
'CUDA=no',
|
|
'CUDA_PATH=%s' % (spec['cuda'].prefix if '+cuda' in spec else ''),
|
|
'CFOPENMP=%s' % (self.compiler.openmp_flag
|
|
if '+openmp' in spec else ''),
|
|
'CFLAGS=-O3 %s' % pic_flag,
|
|
# Both FFLAGS and F77FLAGS are used in SuiteSparse makefiles;
|
|
# FFLAGS is used in CHOLMOD, F77FLAGS is used in AMD and UMFPACK.
|
|
'FFLAGS=%s' % pic_flag,
|
|
'F77FLAGS=%s' % pic_flag,
|
|
# use Spack's metis in CHOLMOD/Partition module,
|
|
# otherwise internal Metis will be compiled
|
|
'MY_METIS_LIB=%s' % spec['metis'].libs.ld_flags,
|
|
'MY_METIS_INC=%s' % spec['metis'].prefix.include,
|
|
# Make sure Spack's Blas/Lapack is used. Otherwise System's
|
|
# Blas/Lapack might be picked up. Need to add -lstdc++, following
|
|
# with the TCOV path of SparseSuite 4.5.1's Suitesparse_config.mk,
|
|
# even though this fix is ugly
|
|
'BLAS=%s' % (spec['blas'].libs.ld_flags + (
|
|
' -lstdc++' if '@4.5.1' in spec else '')),
|
|
'LAPACK=%s' % spec['lapack'].libs.ld_flags,
|
|
]
|
|
|
|
# 64bit blas in UMFPACK:
|
|
if (spec.satisfies('^openblas+ilp64') or
|
|
spec.satisfies('^intel-mkl+ilp64') or
|
|
spec.satisfies('^intel-parallel-studio+mkl+ilp64')):
|
|
make_args.append('UMFPACK_CONFIG=-DLONGBLAS="long long"')
|
|
|
|
# SuiteSparse defaults to using '-fno-common -fexceptions' in
|
|
# CFLAGS, but not all compilers use the same flags for these
|
|
# optimizations
|
|
if any([x in spec
|
|
for x in ('%clang', '%gcc', '%intel')]):
|
|
make_args += ['CFLAGS+=-fno-common -fexceptions']
|
|
elif '%pgi' in spec:
|
|
make_args += ['CFLAGS+=--exceptions']
|
|
|
|
if spack_f77.endswith('xlf') or spack_f77.endswith('xlf_r'):
|
|
make_args += ['CFLAGS+=-DBLAS_NO_UNDERSCORE']
|
|
|
|
# Intel TBB in SuiteSparseQR
|
|
if 'tbb' in spec:
|
|
make_args += [
|
|
'SPQR_CONFIG=-DHAVE_TBB',
|
|
'TBB=%s' % spec['tbb'].libs.ld_flags,
|
|
]
|
|
|
|
if '@5.3:' in spec:
|
|
# Without CMAKE_LIBRARY_PATH defined, the CMake file in the
|
|
# Mongoose directory finds libsuitesparseconfig.so in system
|
|
# directories like /usr/lib.
|
|
make_args += [
|
|
'CMAKE_OPTIONS=-DCMAKE_INSTALL_PREFIX=%s' % prefix +
|
|
' -DCMAKE_LIBRARY_PATH=%s' % prefix.lib]
|
|
|
|
make('install', *make_args)
|
|
|
|
@property
|
|
def libs(self):
|
|
"""Export the libraries of SuiteSparse.
|
|
Sample usage: spec['suite-sparse'].libs.ld_flags
|
|
spec['suite-sparse:klu,btf'].libs.ld_flags
|
|
"""
|
|
# Component libraries, ordered by dependency. Any missing components?
|
|
all_comps = ['klu', 'btf', 'umfpack', 'cholmod', 'colamd', 'amd',
|
|
'camd', 'ccolamd', 'cxsparse', 'ldl', 'rbio', 'spqr',
|
|
'suitesparseconfig']
|
|
query_parameters = self.spec.last_query.extra_parameters
|
|
comps = all_comps if not query_parameters else query_parameters
|
|
libs = find_libraries(['lib' + c for c in comps], root=self.prefix.lib,
|
|
shared=True, recursive=False)
|
|
if not libs:
|
|
return None
|
|
libs += find_system_libraries('librt')
|
|
return libs
|