ea6ebedd0e
* py-pybedtools: Create new package * py-pybedtools: add py-six requirement * py-pybedtools: remove py-cython dependency for release version * py-pybedtools: include minimum version of py-pysam
43 lines
1.9 KiB
Python
43 lines
1.9 KiB
Python
##############################################################################
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# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class PyPybedtools(PythonPackage):
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"""pybedtools wraps and extends BEDTools and offers
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feature-level manipulations from within Python."""
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homepage = "http://daler.github.io/pybedtools"
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url = "https://pypi.io/packages/source/p/pybedtools/pybedtools-0.7.10.tar.gz"
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version('0.7.10', 'f003c67e22c48b77f070538368ece70c')
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depends_on('py-setuptools', type='build')
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depends_on('bedtools2', type=('build', 'run'))
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depends_on('py-numpy', type=('build', 'run'))
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depends_on('py-pandas', type=('build', 'run'))
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depends_on('py-pysam@0.8.1:', type=('build', 'run'))
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depends_on('py-six', type=('build', 'run'))
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