35 lines
1.6 KiB
Python
35 lines
1.6 KiB
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RAffyilm(RPackage):
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"""Linear Model of background subtraction and the Langmuir isotherm.
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affyILM is a preprocessing tool which estimates gene expression levels
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for Affymetrix Gene Chips. Input from physical chemistry is employed to
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first background subtract intensities before calculating concentrations
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on behalf of the Langmuir model."""
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bioc = "affyILM"
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version("1.52.0", commit="08ed8c60921ba1b9e04fa90e156eef1a3c899d15")
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version("1.50.0", commit="185cd8e4712a3378ce7a156d4940224bbb2c4122")
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version("1.48.0", commit="4603a4c4d6c2330a8a56a7bb657dc56c51a9393a")
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version("1.46.0", commit="67ffbfa6c881ed83d15604bf4463fe5dba81036b")
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version("1.42.0", commit="b97b29786b866de38802ebbb995169be91e90942")
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version("1.36.0", commit="619ced931ba72860ce4cb41c841bbca1636a1132")
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version("1.34.0", commit="2c02ed2d8fa9a9585d41cf4db0b75d0a07ad8564")
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version("1.32.0", commit="860f2ddada80435d309ba334eff3fab503817755")
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version("1.30.0", commit="c07d91ae52a2a48f0a5f212c3ecf3243741bee13")
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version("1.28.0", commit="307bee3ebc599e0ea4a1d6fa8d5511ccf8bef7de")
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depends_on("r@2.10.0:", type=("build", "run"))
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depends_on("r-gcrma", type=("build", "run"))
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depends_on("r-affxparser@1.16.0:", type=("build", "run"))
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depends_on("r-affy", type=("build", "run"))
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depends_on("r-biobase", type=("build", "run"))
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