48 lines
2.3 KiB
Python
48 lines
2.3 KiB
Python
##############################################################################
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# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class RKeggrest(RPackage):
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"""This package provides functions and routines useful in the analysis
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of somatic signatures (cf. L. Alexandrov et al., Nature 2013). In
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particular, functions to perform a signature analysis with known
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signatures (LCD = linear combination decomposition) and a signature
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analysis on stratified mutational catalogue (SMC = stratify mutational
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catalogue) are provided."""
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homepage = "http://bioconductor.org/packages/KEGGREST"
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url = "https://git.bioconductor.org/packages/KEGGREST"
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list_url = homepage
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version('1.18.1', git='https://git.bioconductor.org/packages/KEGGREST', commit='f6e6f1987e4db9d977a75609fab0cb710be2e2e4')
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version('1.2.0', git='https://git.bioconductor.org/packages/KEGGREST', commit='ed48de0def57a909894e237fa4731c4a052d8849')
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depends_on('r-httr', type=('build', 'run'))
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depends_on('r-png', type=('build', 'run'))
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depends_on('r-biostrings', type=('build', 'run'))
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depends_on('r@3.4.0:3.4.9', when='@1.2.0')
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depends_on('r@3.4.3:3.4.9', when='@1.18.1')
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