38 lines
1.4 KiB
Python
38 lines
1.4 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Meme(AutotoolsPackage):
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"""The MEME Suite allows the biologist to discover novel motifs in
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collections of unaligned nucleotide or protein sequences, and to perform a
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wide variety of other motif-based analyses."""
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homepage = "http://meme-suite.org"
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url = "http://meme-suite.org/meme-software/4.11.4/meme_4.11.4.tar.gz"
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version('4.12.0', '40d282cc33f7dedb06b24b9f34ac15c1')
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version('4.11.4', '371f513f82fa0888205748e333003897')
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variant('mpi', default=True, description='Enable MPI support')
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variant('image-magick', default=False, description='Enable image-magick for png output')
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depends_on('zlib', type=('link'))
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depends_on('libgcrypt', type=('link'))
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depends_on('perl', type=('build', 'run'))
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depends_on('python@2.7:', type=('build', 'run'))
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depends_on('mpi', when='+mpi')
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depends_on('image-magick', type=('build', 'run'), when='+image-magick')
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depends_on('perl-xml-parser', type=('build', 'run'))
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def configure_args(self):
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spec = self.spec
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# have meme build its own versions of libxml2/libxslt, see #6736
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args = ['--enable-build-libxml2', '--enable-build-libxslt']
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if '~mpi' in spec:
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args += ['--enable-serial']
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return args
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