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* nextflow recipe: added latest stable version * tower-cli recipe: added latest release * recipes tower-agent and tower-cli renamed to nf-tower-agent and nf-tower-cli * recipes nf-tower-agent and nf-tower-cli: small fix * nf-core-tools recipe: added most py- dependencies * nf-core-tools: recipe without galaxy-tool-util (for testing) * fixed typos in py-yacman recipe * fixed typos in py-pytest-workflow recipe * fixed typo in nf-core-tools recipe * fixed typos in py-yacman recipe * fixes in recipes for py-questionary and py-url-normalize * fixes to py-yacman recipe * style fixes to py- packages that are dependencies to nf-core-tools * fix in py-requests-cache recipe * added missing dep in py-requests-cache recipe * nf-core-tools deps: removed redundant python dep for py packages oyaml and piper * nf-core-tools recipe: final, incl dep on py-galaxy-tool-util * nf-core-tools: new version with extra dependency * added py-galaxy-util, draft: added some required dep versions, still have to add 40+ deps * nextflow and nf-core-tools packages: added my self as maintainer * style fixes * style fix for nf-core-tools recipe * added license to py-logmuse recipe * audit fixes * style fix after audit fix * py-galaxy-tool-util: added deps 1st bunch * audit/style fixes, including adding missing dep package * more audit/style fixes * more more audit/style fixes * moooore audit fixes * py-galaxy-tool-util: dependencies 2nd chunk * silly audit fix * py-galaxy-util deps: 3rd bunch - first 20 done * fixes * style fix * py-galaxy-tool-util: 4th bunch of deps * stashing dep recipe backbones for py-galaxy-tool-util * nf-core-tools: using pre-built wheel for dependency py-galaxy-tool-util * nf-core-tools: adding also py-galaxy-util, as wheel * fix * nextflow: added latest bugfix version * Update var/spack/repos/builtin/packages/nf-core-tools/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/nf-core-tools/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * nf-core-tools pr: 1st bunch of review edits * nf-core-tools: 2nd bunch of review edits * adding back tower-agent and tower-cli as deprecated * nf-core-tools: 3rd bunch of review edits * small style fix * prepping py-galaxy-tool-util for further work * nf-core-tools: last bunch of deps, except for galaxy-tool-util and pulsar * audit fixes * updates to py-galaxy-tool-util and its deps, still 2 to work on * one style fix * updated recipe for py-galaxy-util * updated recipe for py-pulsar-galaxy-lib * typo fix * shasum fixes * updated py-sqlalchemy from develop * added newest versions (today) for nf-tower-agent and nf-tower-cli * Update var/spack/repos/builtin/packages/py-requests-cache/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-requests-cache/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * adding 2nd bunch of nf-core deps from update/nextflow-tools * adding 3rd bunch of nf-core deps from update/nextflow-tools * 4th chunk of nf-core deps from update/nextflow-tools * Update var/spack/repos/builtin/packages/py-dnspython/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-dnspython/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-dnspython/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pastedeploy/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pebble/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-fastapi/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-fastapi/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-gunicorn/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-starlette/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-starlette/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-starlette/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-parsley/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-paste/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-paste/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-gxformat2: added comment * py-lagom: now using github tarballs * fix for py-lagom * adding missing deps to py-fastapi-utils * another fix to py-lagom * Update var/spack/repos/builtin/packages/py-dnspython/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-lagom/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-supervisor/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-social-auth-core/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fixes from PR review * adding missing deps, from PR review * py-galaxy2cwl from github tarball, as per PR review * fix to py-tuswsgi, as per PR review * nf-tools: edits from PR review * adding 3x more galaxy deps * fix * fixing circular dep of py-poetry-plugin-export with py-poetry * added newest nf-core-tools version * Update var/spack/repos/builtin/packages/py-galaxy-util/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fix in py-poetry-plugin-export Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
22 lines
720 B
Python
22 lines
720 B
Python
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PyGalaxyObjectstore(PythonPackage):
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"""The Galaxy object store framework and default implementations."""
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homepage = "https://github.com/galaxyproject/galaxy"
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pypi = "galaxy-objectstore/galaxy-objectstore-22.1.1.tar.gz"
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version("22.1.1", sha256="321a70f8bce89fec8d0322ba5821ee0b26d5cd3170a8dc9b7278cd383a9e88dd")
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depends_on("py-setuptools", type="build")
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depends_on("py-galaxy-util", type=("build", "run"))
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depends_on("py-pyyaml", type=("build", "run"))
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