45 lines
2.4 KiB
Python
45 lines
2.4 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RDelayedmatrixstats(RPackage):
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"""Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects
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A port of the 'matrixStats' API for use with DelayedMatrix objects from
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the 'DelayedArray' package. High-performing functions operating on rows
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and columns of DelayedMatrix objects, e.g. col / rowMedians(), col /
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rowRanks(), and col / rowSds(). Functions optimized per data type and
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for subsetted calculations such that both memory usage and processing
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time is minimized."""
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homepage = "https://github.com/PeteHaitch/DelayedMatrixStats"
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git = "https://git.bioconductor.org/packages/DelayedMatrixStats.git"
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version('1.12.3', commit='2b3091dfa9b3bab914e3a4157182063714ba86ae')
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version('1.6.1', commit='4378d1898a403305a94b122c4f36d1215fa7708d')
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version('1.4.0', commit='eb5b390ef99651fe87a346848f807de95afe8971')
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version('1.2.0', commit='de868e730be6280dfad41a280ab09f4d3083c9ac')
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version('1.0.3', commit='e29a3444980ff727c5b12286884b06dfaebf5b5b')
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depends_on('r-matrixgenerics', when='@1.12.2:', type=('build', 'run'))
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depends_on('r-delayedarray', type=('build', 'run'))
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depends_on('r-delayedarray@0.5.27:', when='@1.2.0:', type=('build', 'run'))
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depends_on('r-delayedarray@0.7.37:', when='@1.4.0:', type=('build', 'run'))
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depends_on('r-delayedarray@0.9.8:', when='@1.6.1:', type=('build', 'run'))
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depends_on('r-delayedarray@0.15.3:', when='@1.12.2:', type=('build', 'run'))
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depends_on('r-matrixstats@0.53.1:', type=('build', 'run'))
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depends_on('r-matrixstats@0.55.0:', when='@1.6.1:', type=('build', 'run'))
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depends_on('r-matrixstats@0.56.0:', when='@1.12.2:', type=('build', 'run'))
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depends_on('r-sparsematrixstats', when='@1.12.2:', type=('build', 'run'))
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depends_on('r-matrix', type=('build', 'run'))
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depends_on('r-s4vectors', type=('build', 'run'))
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depends_on('r-s4vectors@0.17.5:', when='@1.2.0:', type=('build', 'run'))
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depends_on('r-iranges', type=('build', 'run'))
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depends_on('r-hdf5array@1.7.10:', when='@1.4.0:', type=('build', 'run'))
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depends_on('r-hdf5array@1.17.2:', when='@1.12.2:', type=('build', 'run'))
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depends_on('r-biocparallel', when='@1.4.0:', type=('build', 'run'))
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