30 lines
950 B
Python
30 lines
950 B
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Halc(MakefilePackage):
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"""HALC is software that makes error correction for long reads with
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high throughput."""
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homepage = "https://github.com/lanl001/halc"
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url = "https://github.com/lanl001/halc/archive/v1.1.tar.gz"
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version('1.1', sha256='79675c3d6c40f567c2e1a5b5e7ec4fb150036582054f6ad079e06b73bd71c1ad')
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depends_on('blasr', type='run')
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depends_on('lordec', type='run')
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depends_on('dos2unix', type='build')
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depends_on('python', type='run')
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parallel = False
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def install(self, spec, prefix):
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install_tree('bin', prefix.bin)
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install('runHALC.py', prefix.bin)
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dos2unix = which('dos2unix')
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dos2unix(join_path(self.prefix.bin, 'runHALC.py'))
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