a8ccb8e116
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
30 lines
1.2 KiB
Python
30 lines
1.2 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Gcta(Package):
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"""GCTA (Genome-wide Complex Trait Analysis) was originally designed to
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estimate the proportion of phenotypic variance explained by all genome-wide
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SNPs for complex traits (the GREML method), and has subsequently extended
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for many other analyses to better understand the genetic architecture of
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complex traits. GCTA currently supports the following analyses."""
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homepage = "http://cnsgenomics.com/software/gcta/#Overview"
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url = "http://cnsgenomics.com/software/gcta/gcta_1.91.2beta.zip"
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version('1.91.2beta_mac', 'ce0882ad35dd9474ffe40911da369274700af1ecb9916c0a355b7bad14850234')
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version('1.91.2beta', '192efb767be1c7ca9c2dac5d2c2317a97c7a9db1f801168d19ad2a51b98d9b10', preferred=True)
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conflicts('@1.91.2beta', when='platform=darwin')
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conflicts('@1.91.2beta_mac', when='platform=linux')
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install('gcta64', join_path(prefix.bin, 'gcta64'))
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set_executable(join_path(prefix.bin, 'gcta64'))
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