eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
35 lines
1.3 KiB
Python
35 lines
1.3 KiB
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Microbiomeutil(MakefilePackage):
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"""Microbiome analysis utilities"""
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homepage = "http://microbiomeutil.sourceforge.net/"
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url = "https://downloads.sourceforge.net/project/microbiomeutil/microbiomeutil-r20110519.tgz"
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version('20110519', '11eaac4b0468c05297ba88ec27bd4b56')
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depends_on('perl', type=('build', 'run'))
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depends_on('blast-plus')
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depends_on('cdbfasta')
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def install(self, spec, prefix):
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install_tree('ChimeraSlayer', prefix.ChimeraSlayer)
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install_tree('NAST-iEr', join_path(prefix, 'NAST-iEr'))
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install_tree('TreeChopper', prefix.TreeChopper)
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install_tree('WigeoN', prefix.WigeoN)
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install_tree('docs', prefix.docs)
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install_tree('RESOURCES', prefix.resources)
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install_tree('AmosCmp16Spipeline', prefix.AmosCmp16Spipeline)
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def setup_environment(self, spack_env, run_env):
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run_env.prepend_path('PATH', self.prefix.ChimeraSlayer)
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run_env.prepend_path('PATH', join_path(self.prefix, 'NAST-iEr'))
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run_env.prepend_path('PATH', self.prefix.TreeChopper)
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run_env.prepend_path('PATH', self.prefix.WigeoN)
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