/*
  Copyright (c) 2014, Rafat Hussain
*/

#include "wavelib.h"

wave_object wave_init(char* wname) {
	wave_object obj = NULL;
	int retval;
	retval = 0;

	if (wname != NULL) {
		retval = filtlength(wname);
		//obj->filtlength = retval;
		//strcopy(obj->wname, wname);
	}

	obj = (wave_object)malloc(sizeof(struct wave_set) + sizeof(double)* 4 * retval);

	obj->filtlength = retval;
	obj->lpd_len = obj->hpd_len = obj->lpr_len = obj->hpr_len = obj->filtlength;
	strcpy(obj->wname, wname);
	if (wname != NULL) {
		filtcoef(wname,obj->params,obj->params+retval,obj->params+2*retval,obj->params+3*retval);
	}
	obj->lpd = &obj->params[0];
	obj->hpd = &obj->params[retval];
	obj->lpr = &obj->params[2 * retval];
	obj->hpr = &obj->params[3 * retval];
	return obj;
}

wt_object wt_init(wave_object wave,char* method, int siglength,int J) {
	int size,i,MaxIter;
	wt_object obj = NULL;

	size = wave->filtlength;

	if (J > 100) {
		printf("\n The Decomposition Iterations Cannot Exceed 100. Exiting \n");
		exit(-1);
	}

	MaxIter = wmaxiter(siglength, size);

	if (J > MaxIter) {
		printf("\n Error - The Signal Can only be iterated %d times using this wavelet. Exiting\n",MaxIter);
		exit(-1);
	}

	if (method == NULL) {
		obj = (wt_object)malloc(sizeof(struct wt_set) + sizeof(double)* (siglength +  2 * J * (size+1)));
		obj->outlength = siglength + 2 * J * (size + 1); // Default
		strcpy(obj->ext, "sym"); // Default
	}
	else if (!strcmp(method, "dwt") || !strcmp(method, "DWT")) {
		obj = (wt_object)malloc(sizeof(struct wt_set) + sizeof(double)* (siglength + 2 * J * (size + 1)));
		obj->outlength = siglength + 2 * J * (size + 1); // Default
		strcpy(obj->ext, "sym"); // Default
	}
	else if (!strcmp(method, "swt") || !strcmp(method, "SWT")) {
		if (!testSWTlength(siglength, J)) {
			printf("\n For SWT the signal length must be a multiple of 2^J. \n");
			exit(-1);
		}

		obj = (wt_object)malloc(sizeof(struct wt_set) + sizeof(double)* (siglength * (J + 1)));
		obj->outlength = siglength * (J + 1); // Default
		strcpy(obj->ext, "per"); // Default
	}
	else if (!strcmp(method, "modwt") || !strcmp(method, "MODWT")) {

		if (!strstr(wave->wname,"haar")) {
			if (!strstr(wave->wname,"db")) {
				if (!strstr(wave->wname, "sym")) {
					if (!strstr(wave->wname, "coif")) {
						printf("\n MODWT is only implemented for orthogonal wavelet families - db, sym and coif \n");
						exit(-1);
					}
				}
			}
		}

		obj = (wt_object)malloc(sizeof(struct wt_set) + sizeof(double)* (siglength * (J + 1)));
		obj->outlength = siglength * (J + 1); // Default
		strcpy(obj->ext, "per"); // Default
	}

	obj->wave = wave;
	obj->siglength = siglength;
	obj->J = J;
	obj->MaxIter = MaxIter;
	strcpy(obj->method, method);

	if (siglength % 2 == 0) {
		obj->even = 1;
	}
	else {
		obj->even = 0;
	}

	obj->cobj = NULL;

	strcpy(obj->cmethod, "direct"); // Default
	obj->cfftset = 0;
	obj->lenlength = J + 2;
	obj->output = &obj->params[0];
	if (!strcmp(method, "dwt") || !strcmp(method, "DWT")) {
		for (i = 0; i < siglength + 2 * J * (size + 1); ++i) {
			obj->params[i] = 0.0;
		}
	}
	else if (!strcmp(method, "swt") || !strcmp(method, "SWT") || !strcmp(method, "modwt") || !strcmp(method, "MODWT")) {
		for (i = 0; i < siglength * (J + 1); ++i) {
			obj->params[i] = 0.0;
		}
	}
	//wave_summary(obj->wave);

	return obj;
}

wtree_object wtree_init(wave_object wave, int siglength,int J) {
    int size,i,MaxIter,temp,temp2,elength,nodes;
	wtree_object obj = NULL;

	size = wave->filtlength;

	if (J > 100) {
		printf("\n The Decomposition Iterations Cannot Exceed 100. Exiting \n");
		exit(-1);
	}


	MaxIter = wmaxiter(siglength, size);
	if (J > MaxIter) {
		printf("\n Error - The Signal Can only be iterated %d times using this wavelet. Exiting\n", MaxIter);
		exit(-1);
	}
	temp = 1;
	elength = 0;
	nodes = 0;
	for(i = 0; i < J;++i) {
	  temp *= 2;
	  nodes += temp;
	  temp2 = (size - 2) * (temp - 1);
	  elength += temp2;
	}

	obj = (wtree_object)malloc(sizeof(struct wtree_set) + sizeof(double)* (siglength * (J + 1) + elength + nodes + J + 1));
	obj->outlength = siglength * (J + 1) + elength;
	strcpy(obj->ext, "sym");

	obj->wave = wave;
	obj->siglength = siglength;
	obj->J = J;
	obj->MaxIter = MaxIter;
	strcpy(obj->method, "dwt");

	if (siglength % 2 == 0) {
		obj->even = 1;
	}
	else {
		obj->even = 0;
	}

	obj->cobj = NULL;
	obj->nodes = nodes;

	obj->cfftset = 0;
	obj->lenlength = J + 2;
	obj->output = &obj->params[0];
	obj->nodelength = (int*) &obj->params[siglength * (J + 1) + elength];
	obj->coeflength = (int*)&obj->params[siglength * (J + 1) + elength + nodes];

	for (i = 0; i < siglength * (J + 1) + elength + nodes + J + 1; ++i) {
	       obj->params[i] = 0.0;
	}

	//wave_summary(obj->wave);

	return obj;
}

wpt_object wpt_init(wave_object wave, int siglength, int J) {
	int size, i, MaxIter, temp, nodes,elength,p2,N,lp;
	wpt_object obj = NULL;

	size = wave->filtlength;

	if (J > 100) {
		printf("\n The Decomposition Iterations Cannot Exceed 100. Exiting \n");
		exit(-1);
	}


	MaxIter = wmaxiter(siglength, size);
	if (J > MaxIter) {
		printf("\n Error - The Signal Can only be iterated %d times using this wavelet. Exiting\n", MaxIter);
		exit(-1);
	}
	temp = 1;
	nodes = 0;
	for (i = 0; i < J; ++i) {
		temp *= 2;
		nodes += temp;
	}

	i = J;
	p2 = 2;
	N = siglength;
	lp = size;
	elength = 0;
	while (i > 0) {
		N = N + lp - 2;
		N = (int)ceil((double)N / 2.0);
		elength = p2 * N;
		i--;
		p2 *= 2;
	}
	//printf("elength %d", elength);

	obj = (wpt_object)malloc(sizeof(struct wpt_set) + sizeof(double)* (elength + 4 * nodes + 2 * J + 6));
	obj->outlength = siglength + 2 * (J + 1) * (size + 1);
	strcpy(obj->ext, "sym");
	strcpy(obj->entropy, "shannon");
	obj->eparam = 0.0;

	obj->wave = wave;
	obj->siglength = siglength;
	obj->J = J;
	obj->MaxIter = MaxIter;

	if (siglength % 2 == 0) {
		obj->even = 1;
	}
	else {
		obj->even = 0;
	}

	obj->cobj = NULL;
	obj->nodes = nodes;

	obj->lenlength = J + 2;
	obj->output = &obj->params[0];
	obj->costvalues = &obj->params[elength];
	obj->basisvector = &obj->params[elength + nodes + 1];
	obj->nodeindex = (int*)&obj->params[elength + 2*nodes + 2];
	obj->numnodeslevel = (int*)&obj->params[elength + 4 * nodes + 4];
	obj->coeflength = (int*)&obj->params[elength + 4 * nodes + J + 5];

	for (i = 0; i < elength + 4 * nodes + 2 * J + 6; ++i) {
		obj->params[i] = 0.0;
	}

	//wave_summary(obj->wave);

	return obj;
}

cwt_object cwt_init(char* wave, double param,int siglength, double dt, int J) {
	cwt_object obj = NULL;
	int N, i,nj2,ibase2,mother;
	double s0, dj;
	double t1;
	int m, odd;
	char *pdefault = "pow";

	m = (int)param;
	odd = 1;
	if (2 * (m / 2) == m) {
		odd = 0;
	}

	N = siglength;
	nj2 = 2 * N * J;
	obj = (cwt_object)malloc(sizeof(struct cwt_set) + sizeof(double)* (nj2 + 2 * J + N));

	if (!strcmp(wave, "morlet") || !strcmp(wave, "morl")) {
		s0 = 2 * dt;
		dj = 0.4875;
		mother = 0;
		if (param < 0.0) {
			printf("\n Morlet Wavelet Parameter should be >= 0 \n");
			exit(-1);
		}
		if (param == 0) {
			param = 6.0;
		}
		strcpy(obj->wave,"morlet");
		
	}
	else if (!strcmp(wave, "paul")) {
		s0 = 2 * dt;
		dj = 0.4875;
		mother = 1;
		if (param < 0 || param > 20) {
			printf("\n Paul Wavelet Parameter should be > 0 and <= 20 \n");
			exit(-1);
		}
		if (param == 0) {
			param = 4.0;
		}
		strcpy(obj->wave,"paul");
	
	}
	else if (!strcmp(wave, "dgauss") || !strcmp(wave, "dog")) {
		s0 = 2 * dt;
		dj = 0.4875;
		mother = 2;
		if (param < 0 || odd == 1) {
			printf("\n DOG Wavelet Parameter should be > 0 and even \n");
			exit(-1);
		}
		if (param == 0) {
			param = 2.0;
		}
		strcpy(obj->wave,"dog");
	}

	obj->pow = 2;
	strcpy(obj->type, pdefault);

	obj->s0 = s0;
	obj->dj = dj;
	obj->dt = dt;
	obj->J = J;
	obj->siglength = siglength;
	obj->sflag = 0;
	obj->pflag = 1;
	obj->mother = mother;
	obj->m = param;

	t1 = 0.499999 + log((double)N) / log(2.0);
	ibase2 = 1 + (int)t1;

	obj->npad = (int)pow(2.0, (double)ibase2);

	obj->output = (cplx_data*) &obj->params[0];
	obj->scale = &obj->params[nj2];
	obj->period = &obj->params[nj2 + J];
	obj->coi = &obj->params[nj2 + 2*J];

	for (i = 0; i < nj2 + 2 * J + N; ++i) {
		obj->params[i] = 0.0;
	}

	return obj;
}


static void wconv(wt_object wt, double *sig, int N, double *filt, int L, double *oup) {
	if (!strcmp(wt->cmethod,"direct")) {
		conv_direct(sig, N, filt, L, oup);
	}
	else if (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT")) {
		if (wt->cfftset == 0) {
			wt->cobj = conv_init(N, L);
			conv_fft(wt->cobj, sig, filt, oup);
			free_conv(wt->cobj);
		}
		else {
			conv_fft(wt->cobj, sig, filt, oup);
		}
	}
	else {
		printf("Convolution Only accepts two methods - direct and fft");
		exit(-1);
	}
}


static void dwt_per(wt_object wt, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int l,l2,isodd,i,t,len_avg;

	len_avg = wt->wave->lpd_len;
	l2 = len_avg / 2;
	isodd = N % 2;

	for (i = 0; i < len_cA; ++i) {
		t = 2 * i + l2;
		cA[i] = 0.0;
		cD[i] = 0.0;
		for (l = 0; l < len_avg; ++l) {
			if ((t - l) >= l2 && (t - l) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < l2 && (t - l) >= 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < 0 && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l + N];
				cD[i] += wt->wave->hpd[l] * inp[t - l + N];
			}
			else if ((t - l) < 0 && isodd == 1) {
				if ((t - l) != -1) {
					cA[i] += wt->wave->lpd[l] * inp[t - l + N + 1];
					cD[i] += wt->wave->hpd[l] * inp[t - l + N + 1];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}
			else if ((t - l) >= N && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l - N];
				cD[i] += wt->wave->hpd[l] * inp[t - l - N];
			}
			else if ((t - l) >= N && isodd == 1) {
				if (t - l != N) {
					cA[i] += wt->wave->lpd[l] * inp[t - l - (N + 1)];
					cD[i] += wt->wave->hpd[l] * inp[t - l - (N + 1)];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}

		}
	}



}

static void wtree_per(wtree_object wt, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int l, l2, isodd, i, t, len_avg;

	len_avg = wt->wave->lpd_len;
	l2 = len_avg / 2;
	isodd = N % 2;

	for (i = 0; i < len_cA; ++i) {
		t = 2 * i + l2;
		cA[i] = 0.0;
		cD[i] = 0.0;
		for (l = 0; l < len_avg; ++l) {
			if ((t - l) >= l2 && (t - l) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < l2 && (t - l) >= 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < 0 && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l + N];
				cD[i] += wt->wave->hpd[l] * inp[t - l + N];
			}
			else if ((t - l) < 0 && isodd == 1) {
				if ((t - l) != -1) {
					cA[i] += wt->wave->lpd[l] * inp[t - l + N + 1];
					cD[i] += wt->wave->hpd[l] * inp[t - l + N + 1];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}
			else if ((t - l) >= N && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l - N];
				cD[i] += wt->wave->hpd[l] * inp[t - l - N];
			}
			else if ((t - l) >= N && isodd == 1) {
				if (t - l != N) {
					cA[i] += wt->wave->lpd[l] * inp[t - l - (N + 1)];
					cD[i] += wt->wave->hpd[l] * inp[t - l - (N + 1)];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}

		}
	}



}

static void dwpt_per(wpt_object wt, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int l, l2, isodd, i, t, len_avg;

	len_avg = wt->wave->lpd_len;
	l2 = len_avg / 2;
	isodd = N % 2;

	for (i = 0; i < len_cA; ++i) {
		t = 2 * i + l2;
		cA[i] = 0.0;
		cD[i] = 0.0;
		for (l = 0; l < len_avg; ++l) {
			if ((t - l) >= l2 && (t - l) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < l2 && (t - l) >= 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < 0 && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l + N];
				cD[i] += wt->wave->hpd[l] * inp[t - l + N];
			}
			else if ((t - l) < 0 && isodd == 1) {
				if ((t - l) != -1) {
					cA[i] += wt->wave->lpd[l] * inp[t - l + N + 1];
					cD[i] += wt->wave->hpd[l] * inp[t - l + N + 1];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}
			else if ((t - l) >= N && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - l - N];
				cD[i] += wt->wave->hpd[l] * inp[t - l - N];
			}
			else if ((t - l) >= N && isodd == 1) {
				if (t - l != N) {
					cA[i] += wt->wave->lpd[l] * inp[t - l - (N + 1)];
					cD[i] += wt->wave->hpd[l] * inp[t - l - (N + 1)];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}

		}
	}



}

static void dwt_sym(wt_object wt, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int i,l, t, len_avg;

	len_avg = wt->wave->lpd_len;

	for (i = 0; i < len_cA; ++i) {
		t = 2 * i + 1;
		cA[i] = 0.0;
		cD[i] = 0.0;
		for (l = 0; l < len_avg; ++l) {
			if ((t - l) >= 0 && (t - l) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < 0) {
				cA[i] += wt->wave->lpd[l] * inp[-t + l - 1];
				cD[i] += wt->wave->hpd[l] * inp[-t + l - 1];
			}
			else if ((t - l) >= N) {
				cA[i] += wt->wave->lpd[l] * inp[2 * N - t + l - 1];
				cD[i] += wt->wave->hpd[l] * inp[2 * N - t + l - 1];
			}

		}
	}


}

static void wtree_sym(wtree_object wt, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int i, l, t, len_avg;

	len_avg = wt->wave->lpd_len;

	for (i = 0; i < len_cA; ++i) {
		t = 2 * i + 1;
		cA[i] = 0.0;
		cD[i] = 0.0;
		for (l = 0; l < len_avg; ++l) {
			if ((t - l) >= 0 && (t - l) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < 0) {
				cA[i] += wt->wave->lpd[l] * inp[-t + l - 1];
				cD[i] += wt->wave->hpd[l] * inp[-t + l - 1];
			}
			else if ((t - l) >= N) {
				cA[i] += wt->wave->lpd[l] * inp[2 * N - t + l - 1];
				cD[i] += wt->wave->hpd[l] * inp[2 * N - t + l - 1];
			}

		}
	}


}

static void dwpt_sym(wpt_object wt, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int i, l, t, len_avg;

	len_avg = wt->wave->lpd_len;

	for (i = 0; i < len_cA; ++i) {
		t = 2 * i + 1;
		cA[i] = 0.0;
		cD[i] = 0.0;
		for (l = 0; l < len_avg; ++l) {
			if ((t - l) >= 0 && (t - l) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - l];
				cD[i] += wt->wave->hpd[l] * inp[t - l];
			}
			else if ((t - l) < 0) {
				cA[i] += wt->wave->lpd[l] * inp[-t + l - 1];
				cD[i] += wt->wave->hpd[l] * inp[-t + l - 1];
			}
			else if ((t - l) >= N) {
				cA[i] += wt->wave->lpd[l] * inp[2 * N - t + l - 1];
				cD[i] += wt->wave->hpd[l] * inp[2 * N - t + l - 1];
			}

		}
	}


}

static void dwt1(wt_object wt,double *sig,int len_sig, double *cA, int len_cA, double *cD, int len_cD) {
	int len_avg,D,lf;
	double *signal,*cA_undec;
	len_avg = (wt->wave->lpd_len + wt->wave->hpd_len) / 2;
	//len_sig = 2 * (int)ceil((double)len_sig / 2.0);

	D = 2;

	if (!strcmp(wt->ext, "per")) {
		signal = (double*)malloc(sizeof(double)* (len_sig + len_avg + (len_sig % 2)));

		len_sig = per_ext(sig, len_sig, len_avg / 2, signal);

		cA_undec = (double*)malloc(sizeof(double)* (len_sig + len_avg + wt->wave->lpd_len - 1));

		if (wt->wave->lpd_len == wt->wave->hpd_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
			wt->cobj = conv_init(len_sig + len_avg, wt->wave->lpd_len);
			wt->cfftset = 1;
		}
		else if (!(wt->wave->lpd_len == wt->wave->hpd_len)) {
			printf("Decomposition Filters must have the same length.");
			exit(-1);
		}

		wconv(wt, signal, len_sig + len_avg, wt->wave->lpd, wt->wave->lpd_len, cA_undec);

		downsamp(cA_undec + len_avg, len_sig, D, cA);

		wconv(wt, signal, len_sig + len_avg, wt->wave->hpd, wt->wave->hpd_len, cA_undec);

		downsamp(cA_undec + len_avg, len_sig, D, cD);
	}
	else if (!strcmp(wt->ext, "sym")) {
		//printf("\n YES %s \n", wt->ext);
		lf = wt->wave->lpd_len;// lpd and hpd have the same length

		signal = (double*)malloc(sizeof(double)* (len_sig + 2 * (lf - 1)));

		len_sig = symm_ext(sig, len_sig, lf - 1, signal);

		cA_undec = (double*)malloc(sizeof(double)* (len_sig + 3 * (lf - 1)));

		if (wt->wave->lpd_len == wt->wave->hpd_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
			wt->cobj = conv_init(len_sig + 2 * (lf - 1), lf);
			wt->cfftset = 1;
		}
		else if (!(wt->wave->lpd_len == wt->wave->hpd_len)) {
			printf("Decomposition Filters must have the same length.");
			exit(-1);
		}


		wconv(wt, signal, len_sig + 2 * (lf - 1), wt->wave->lpd, wt->wave->lpd_len, cA_undec);

		downsamp(cA_undec + lf, len_sig + lf - 2, D, cA);

		wconv(wt, signal, len_sig + 2 * (lf - 1), wt->wave->hpd, wt->wave->hpd_len, cA_undec);

		downsamp(cA_undec + lf, len_sig + lf - 2, D, cD);
	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}


	if (wt->wave->lpd_len == wt->wave->hpd_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
		free_conv(wt->cobj);
		wt->cfftset = 0;
	}

	free(signal);
	free(cA_undec);
}

void dwt(wt_object wt,double *inp) {
	int i,J,temp_len,iter,N,lp;
	int len_cA;
	double *orig,*orig2;

	temp_len = wt->siglength;
	J = wt->J;
	wt->length[J + 1] = temp_len;
	wt->outlength = 0;
	wt->zpad = 0;
	orig = (double*)malloc(sizeof(double)* temp_len);
	orig2 = (double*)malloc(sizeof(double)* temp_len);
	/*
	if ((temp_len % 2) == 0) {
	wt->zpad = 0;
	orig = (double*)malloc(sizeof(double)* temp_len);
	orig2 = (double*)malloc(sizeof(double)* temp_len);
	}
	else {
	wt->zpad = 1;
	temp_len++;
	orig = (double*)malloc(sizeof(double)* temp_len);
	orig2 = (double*)malloc(sizeof(double)* temp_len);
	}
	*/

	for (i = 0; i < wt->siglength; ++i) {
		orig[i] = inp[i];
	}

	if (wt->zpad == 1) {
		orig[temp_len - 1] = orig[temp_len - 2];
	}

	N = temp_len;
	lp = wt->wave->lpd_len;

	if (!strcmp(wt->ext,"per")) {
		i = J;
		while (i > 0) {
			N = (int)ceil((double)N / 2.0);
			wt->length[i] = N;
			wt->outlength += wt->length[i];
			i--;
		}
		wt->length[0] = wt->length[1];
		wt->outlength += wt->length[0];
		N = wt->outlength;

		for (iter = 0; iter < J; ++iter) {
			len_cA = wt->length[J - iter];
			N -= len_cA;
			if ( !strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT") ) {
				dwt1(wt, orig, temp_len, orig2, len_cA, wt->params + N, len_cA);
			}
			else {
				dwt_per(wt, orig, temp_len, orig2, len_cA, wt->params + N, len_cA);
			}
			temp_len = wt->length[J - iter];
			if (iter == J - 1) {
				for (i = 0; i < len_cA; ++i) {
					wt->params[i] = orig2[i];
				}
			}
			else {
				for (i = 0; i < len_cA; ++i) {
					orig[i] = orig2[i];
				}
			}
		}
	}
	else if (!strcmp(wt->ext,"sym")) {
		//printf("\n YES %s \n", wt->ext);
		i = J;
		while (i > 0) {
			N = N + lp - 2;
			N = (int) ceil((double)N / 2.0);
			wt->length[i] = N;
			wt->outlength += wt->length[i];
			i--;
		}
		wt->length[0] = wt->length[1];
		wt->outlength += wt->length[0];
		N = wt->outlength;

		for (iter = 0; iter < J; ++iter) {
			len_cA = wt->length[J - iter];
			N -= len_cA;
			if (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT")) {
				dwt1(wt, orig, temp_len, orig2, len_cA, wt->params + N, len_cA);
			}
			else {
				dwt_sym(wt, orig, temp_len, orig2, len_cA, wt->params + N, len_cA);
			}
			temp_len = wt->length[J - iter];

			if (iter == J - 1) {
				for (i = 0; i < len_cA; ++i) {
					wt->params[i] = orig2[i];
				}
			}
			else {
				for (i = 0; i < len_cA; ++i) {
					orig[i] = orig2[i];
				}
			}
		}
	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}

	free(orig);
	free(orig2);
}

void wtree(wtree_object wt,double *inp) {
	int i,J,temp_len,iter,N,lp,p2,k,N2,Np;
	int len_cA,t,t2,it1;
	double *orig;

	temp_len = wt->siglength;
	J = wt->J;
	wt->length[J + 1] = temp_len;
	wt->outlength = 0;
	wt->zpad = 0;
	orig = (double*)malloc(sizeof(double)* temp_len);
	/*
	if ((temp_len % 2) == 0) {
		wt->zpad = 0;
		orig = (double*)malloc(sizeof(double)* temp_len);
	}
	else {
		wt->zpad = 1;
		temp_len++;
		orig = (double*)malloc(sizeof(double)* temp_len);
	}
	*/
	for (i = 0; i < wt->siglength; ++i) {
		orig[i] = inp[i];
	}

	if (wt->zpad == 1) {
		orig[temp_len - 1] = orig[temp_len - 2];
	}

	N = temp_len;
	lp = wt->wave->lpd_len;
        p2 = 1;

	if (!strcmp(wt->ext,"per")) {
		i = J;
                p2 = 2;
		while (i > 0) {
			N = (int)ceil((double)N / 2.0);
			wt->length[i] = N;
			wt->outlength += p2 * (wt->length[i]);
			i--;
                        p2 *= 2;
		}
		wt->length[0] = wt->length[1];

		N2 = N = wt->outlength;
                p2 = 1;
		for (iter = 0; iter < J; ++iter) {
			len_cA = wt->length[J - iter];
                        N2 -= 2 * p2 * len_cA;
                        N = N2;
                        for(k = 0; k < p2;++k) {
                            if (iter == 0) {
                               wtree_per(wt, orig, temp_len, wt->params + N, len_cA, wt->params + N + len_cA, len_cA);
                            } else {
                                wtree_per(wt, wt->params + Np + k * temp_len, temp_len, wt->params + N, len_cA, wt->params + N + len_cA, len_cA);
                            }
                            N += 2 * len_cA;
                        }

			temp_len = wt->length[J - iter];
			p2 = 2 * p2;
            Np = N2;
		}
	}
	else if (!strcmp(wt->ext,"sym")) {
		//printf("\n YES %s \n", wt->ext);
		i = J;
                p2 = 2;
		while (i > 0) {
			N = N + lp - 2;
			N = (int) ceil((double)N / 2.0);
			wt->length[i] = N;
			wt->outlength += p2 * (wt->length[i]);
			i--;
                        p2 *= 2;
		}
		wt->length[0] = wt->length[1];

		N2 = N = wt->outlength;
                p2 = 1;

                for (iter = 0; iter < J; ++iter) {
			len_cA = wt->length[J - iter];
                        N2 -= 2 * p2 * len_cA;
                        N = N2;
                        for(k = 0; k < p2;++k) {
                            if (iter == 0) {
                                wtree_sym(wt, orig, temp_len, wt->params + N, len_cA, wt->params + N + len_cA, len_cA);
                            } else {
                                wtree_sym(wt, wt->params + Np + k * temp_len, temp_len, wt->params + N, len_cA, wt->params + N + len_cA, len_cA);
                            }
                            N += 2 * len_cA;
                        }

			temp_len = wt->length[J - iter];
			p2 = 2 * p2;
            Np = N2;
		}

	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}

	J = wt->J;
	t2 = wt->outlength - 2 * wt->length[J];
	p2 = 2;
	it1 = 0;
	for (i = 0; i < J; ++i) {
		t = t2;
		for (k = 0; k < p2; ++k) {
			wt->nodelength[it1] = t;
			it1++;
			t += wt->length[J - i];
		}
		p2 *= 2;
		t2 = t2 - p2 * wt->length[J - i - 1];
	}

	wt->coeflength[0] = wt->siglength;

	for (i = 1; i < J + 1; ++i) {
		wt->coeflength[i] = wt->length[J - i + 1];
	}

	free(orig);
}

static int ipow2(int n) {
	int p,i;
	p = 1;

	for (i = 0; i < n; ++i) {
		p *= 2;
	}

	return p;
}

void dwpt(wpt_object wt, double *inp) {
	int i, J, temp_len, iter, N, lp, p2, k, N2, Np;
	int temp, elength, temp2,size,nodes,llb,n1,j;
	double eparam,v1,v2;
	int len_cA, t, t2, it1,it2;
	double *orig,*tree;
	int *nodelength;

	temp_len = wt->siglength;
	J = wt->J;
	wt->length[J + 1] = temp_len;
	wt->outlength = 0;
	temp = 1;
	elength = 0;
	size = wt->wave->filtlength;
	nodes = wt->nodes;
	n1 = nodes + 1;
	for (i = 0; i < J; ++i) {
		temp *= 2;
		temp2 = (size - 2) * (temp - 1);
		elength += temp2;
	}
	eparam = wt->eparam;
	orig = (double*)malloc(sizeof(double)* temp_len);
	tree = (double*)malloc(sizeof(double)* (temp_len * (J + 1) + elength));
	nodelength = (int*)malloc(sizeof(int)* nodes);

	for (i = 0; i < wt->siglength; ++i) {
		orig[i] = inp[i];
	}

	for (i = 0; i < temp_len * (J + 1) + elength; ++i) {
		tree[i] = 0.0;
	}

	for (i = 0; i < nodes + 1; ++i) {
		wt->basisvector[i] = 0.0;
		wt->costvalues[i] = 0.0;
	}

	N = temp_len;
	lp = wt->wave->lpd_len;
	p2 = 1;

	//set eparam value here
	wt->costvalues[0] = costfunc(orig, wt->siglength, wt->entropy, eparam);
	it2 = 1;
	if (!strcmp(wt->ext, "per")) {
		i = J;
		p2 = 2;
		while (i > 0) {
			N = (int)ceil((double)N / 2.0);
			wt->length[i] = N;
			wt->outlength += p2 * (wt->length[i]);
			i--;
			p2 *= 2;
		}
		wt->length[0] = wt->length[1];

		N2 = N = wt->outlength;
		p2 = 1;
		for (iter = 0; iter < J; ++iter) {
			len_cA = wt->length[J - iter];
			N2 -= 2 * p2 * len_cA;
			N = N2;
			for (k = 0; k < p2; ++k) {
				if (iter == 0) {
					dwpt_per(wt, orig, temp_len, tree + N, len_cA, tree + N + len_cA, len_cA);
				}
				else {
					dwpt_per(wt, tree + Np + k * temp_len, temp_len, tree + N, len_cA, tree + N + len_cA, len_cA);
				}
				wt->costvalues[it2] = costfunc(tree + N, len_cA, wt->entropy, eparam);
				it2++;
				wt->costvalues[it2] = costfunc(tree + N +len_cA, len_cA, wt->entropy, eparam);
				it2++;
				N += 2 * len_cA;
			}

			temp_len = wt->length[J - iter];
			p2 = 2 * p2;
			Np = N2;
		}
	}
	else if (!strcmp(wt->ext, "sym")) {
		//printf("\n YES %s \n", wt->ext);
		i = J;
		p2 = 2;
		while (i > 0) {
			N = N + lp - 2;
			N = (int)ceil((double)N / 2.0);
			wt->length[i] = N;
			wt->outlength += p2 * (wt->length[i]);
			i--;
			p2 *= 2;
		}
		wt->length[0] = wt->length[1];

		N2 = N = wt->outlength;
		p2 = 1;

		for (iter = 0; iter < J; ++iter) {
			len_cA = wt->length[J - iter];
			N2 -= 2 * p2 * len_cA;
			N = N2;
			for (k = 0; k < p2; ++k) {
				if (iter == 0) {
					dwpt_sym(wt, orig, temp_len, tree + N, len_cA, tree + N + len_cA, len_cA);
				}
				else {
					dwpt_sym(wt, tree + Np + k * temp_len, temp_len, tree + N, len_cA, tree + N + len_cA, len_cA);
				}
				wt->costvalues[it2] = costfunc(tree + N, len_cA, wt->entropy, eparam);
				it2++;
				wt->costvalues[it2] = costfunc(tree + N + len_cA, len_cA, wt->entropy, eparam);
				it2++;
				N += 2 * len_cA;
			}

			temp_len = wt->length[J - iter];
			p2 = 2 * p2;
			Np = N2;
		}

	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}

	J = wt->J;
	t2 = wt->outlength - 2 * wt->length[J];
	p2 = 2;
	it1 = 0;
	for (i = 0; i < J; ++i) {
		t = t2;
		for (k = 0; k < p2; ++k) {
			nodelength[it1] = t;
			it1++;
			t += wt->length[J - i];
		}
		p2 *= 2;
		t2 = t2 - p2 * wt->length[J - i - 1];
	}


	J = wt->J;
	llb = 1;
	for (i = 0; i < J; ++i) {
		llb *= 2;
	}

	for (i = n1 - llb; i < n1; ++i) {
		wt->basisvector[i] = 1;
	}

	for (j = J - 1; j >= 0; --j) {
		for (k = ipow2(j) - 1; k < ipow2(j + 1) - 1; ++k) {
			v1 = wt->costvalues[k];
			v2 = wt->costvalues[2 * k + 1] + wt->costvalues[2 * k + 2];
			//printf(" %g %g", v1,v2);
			if (v1 <= v2) {
				wt->basisvector[k] = 1;
			}
			else {
				wt->costvalues[k] = v2;
			}
		}
		//printf("\n");
	}

	for (k = 0; k < nodes / 2; ++k) {
		if (wt->basisvector[k] == 1 || wt->basisvector[k] == 2) {
			wt->basisvector[2 * k + 1] = 2;
			wt->basisvector[2 * k + 2] = 2;
		}
	}

	for (k = 0; k < n1; ++k) {
		if (wt->basisvector[k] == 2) {
			wt->basisvector[k] = 0;
		}
	}

	N2 = 0;
	it1 = n1;
	it2 = 0;
	wt->nodes = 0;
	wt->numnodeslevel[0] = 0;
	//printf("Start \n");

	if (wt->basisvector[0] == 1) {
		wt->outlength = wt->siglength;
		for (i = 0; i < wt->siglength; ++i) {
			wt->output[i] = inp[i];
		}
		wt->nodes = 1;
		wt->nodeindex[0] = 0;
		wt->nodeindex[1] = 0;
		wt->numnodeslevel[0] = 1;
	}
	else {
		for (i = J; i > 0; --i) {
			llb = ipow2(i);
			it1 -= llb;
			wt->numnodeslevel[i] = 0;
			for (j = 0; j < llb; ++j) {
				if (wt->basisvector[it1 + j] == 1) {
					//printf("NODE %d %d %d \n", i, j, wt->length[J - i + 1]);
					wt->nodeindex[2 * wt->nodes] = i;
					wt->nodeindex[2 * wt->nodes + 1] = j;
					wt->nodes += 1;
					wt->numnodeslevel[i] += 1;
					for (k = 0; k < wt->length[J - i + 1]; ++k) {
						wt->output[it2 + k] = tree[nodelength[it1 - 1 + j] + k];// access tree
					}
					it2 += wt->length[J - i + 1];
				}
			}
		}
		wt->outlength = it2;
	}

	wt->coeflength[0] = wt->siglength;

	for (i = 1; i < J + 1; ++i) {
		wt->coeflength[i] = wt->length[J - i + 1];
	}

	free(orig);
	free(tree);
	free(nodelength);
}

int getWTREENodelength(wtree_object wt, int X) {
	int N;
	N = -1;
	/*
	X - Level. All Nodes at any level have the same length
	*/
	if (X <= 0 || X > wt->J) {
		printf("X co-ordinate must be >= 1 and <= %d", wt->J);
		exit(-1);
	}

	N = wt->length[wt->J -X + 1];

	return N;
}

int getDWPTNodelength(wpt_object wt, int X) {
	int N;
	N = -1;
	/*
	X - Level. All Nodes at any level have the same length
	*/
	if (X <= 0 || X > wt->J) {
		printf("X co-ordinate must be >= 1 and <= %d", wt->J);
		exit(-1);
	}

	N = wt->length[wt->J - X + 1];

	return N;
}

void getWTREECoeffs(wtree_object wt, int X,int Y,double *coeffs,int N) {
	int ymax,i,t,t2;

	if (X <= 0 || X > wt->J) {
		printf("X co-ordinate must be >= 1 and <= %d", wt->J);
		exit(-1);
	}
	ymax = 1;
	for (i = 0; i < X; ++i) {
		ymax *= 2;
	}

	ymax -= 1;

	if (Y < 0 ||Y > ymax) {
		printf("Y co-ordinate must be >= 0 and <= %d", ymax);
		exit(-1);
	}

	if (X == 1) {
		t = 0;
	}
	else {
		t = 0;
		t2 = 1;
		for (i = 0; i < X - 1; ++i) {
			t2 *= 2;
			t += t2;
		}
	}

	t += Y;
	t2 = wt->nodelength[t];
	for (i = 0; i < N; ++i) {
		coeffs[i] = wt->output[t2+i];
	}

}

void getDWPTCoeffs(wpt_object wt, int X, int Y, double *coeffs, int N) {
	int ymax, i;
	int np,citer;
	int flag;

	if (X <= 0 || X > wt->J) {
		printf("X co-ordinate must be >= 1 and <= %d", wt->J);
		exit(-1);
	}
	ymax = 1;
	for (i = 0; i < X; ++i) {
		ymax *= 2;
	}

	ymax -= 1;

	if (Y < 0 || Y > ymax) {
		printf("Y co-ordinate must be >= 0 and <= %d", ymax);
		exit(-1);
	}

	np = 0;
	citer = 0;

	for (i = wt->J; i > X; --i) {
		np += wt->numnodeslevel[i];
		citer += wt->numnodeslevel[i] * wt->coeflength[i];
	}

	i = 0;
	flag = 0;
	for (i = 0; i < wt->numnodeslevel[X]; ++i) {
		if (wt->nodeindex[2 * np + 1] == Y) {
			flag = 1;
			break;
		}
		np++;
		citer += wt->coeflength[X];
	}

	if (flag == 0) {
		printf("The Node is Not Part Of The Best Basis Tree Use wpt_summary function to list available nodes \n");
		exit(-1);
	}

	for (i = 0; i < N; ++i) {
		coeffs[i] = wt->output[citer + i];
	}

}

int getCWTScaleLength(int N) {
	int J;
	double temp,dj;

	dj = 0.4875;

	temp = (log((double)N / 2.0) / log(2.0)) / dj;
	J = (int)temp;

	return J;
}

void setCWTScales(cwt_object wt, double s0, double dj,char *type,int power) {
	int i;
	strcpy(wt->type,type);
	//s0*pow(2.0, (double)(j - 1)*dj);
	if (!strcmp(wt->type, "pow") || !strcmp(wt->type, "power")) {
		for (i = 0; i < wt->J; ++i) {
			wt->scale[i] = s0*pow((double) power, (double)(i)*dj);
		}
		wt->sflag = 1;
		wt->pow = power;
		
	}
	else if (!strcmp(wt->type, "lin") || !strcmp(wt->type, "linear")) {
		for (i = 0; i < wt->J; ++i) {
			wt->scale[i] = s0 + (double)i * dj;
		}
		wt->sflag = 1;
	}
	else {
		printf("\n Type accepts only two values : pow and lin\n");
		exit(-1);
	}
	wt->s0 = s0;
	wt->dj = dj;
}

void setCWTScaleVector(cwt_object wt, double *scale, int J,double s0,double dj) {
	int i;

	if (J != wt->J) {
		printf("\n CWT object is only valid for %d scales\n", wt->J);
		exit(-1);
	}

	for (i = 0; i < wt->J; ++i) {
		wt->scale[i] = scale[i];
	}
	wt->dj = dj;
	wt->s0 = s0;
	wt->sflag = 1;
}

void setCWTPadding(cwt_object wt, int pad) {
	if (pad == 0) {
		wt->pflag = 0;
	}
	else {
		wt->pflag = 1;
	}
}

void cwt(cwt_object wt, double *inp) {
	int i, N, npad,nj2,j,j2;
	N = wt->siglength;
	if (wt->sflag == 0) {
		for (i = 0; i < wt->J; ++i) {
			wt->scale[i] = wt->s0*pow(2.0, (double)(i)*wt->dj);
		}
		wt->sflag = 1;
	}

	if (wt->pflag == 0) {
		npad = N;
	}
	else {
		npad = wt->npad;
	}

	nj2 = 2 * N * wt->J;
	j = wt->J;
	j2 = 2 * j;

	wt->smean = 0.0;

	for (i = 0; i < N; ++i) {
		wt->smean += inp[i];
	}
	wt->smean /= N;

	cwavelet(inp, N, wt->dt, wt->mother, wt->m, wt->s0, wt->dj, wt->J,npad,wt->params, wt->params+nj2, wt->params+nj2+j, wt->params+nj2+j2);

}

void icwt(cwt_object wt, double *cwtop) {
	double psi, cdel;
	int real,i,N,nj2;

	N = wt->siglength;
	nj2 = N * 2 * wt->J;

	psi0(wt->mother, wt->m, &psi, &real);
	cdel = cdelta(wt->mother, wt->m, psi);

	//printf("\n PSI %g CDEL %g param %g mother %d \n", psi, cdel,wt->m,wt->mother);
	if ((!strcmp(wt->type, "pow") || !strcmp(wt->type, "power")) && wt->pow == 2) {
		icwavelet(wt->params, N, wt->params+nj2, wt->J, wt->dt, wt->dj, cdel, psi, cwtop);
	} else {
		printf("Inverse CWT is only available for power of 2.0 scales \n");
		exit(-1);
	}
	for(i = 0; i < N;++i) {
		cwtop[i] += wt->smean;
	}
	
}

static void idwt1(wt_object wt,double *temp, double *cA_up,double *cA, int len_cA,double *cD,int len_cD,double *X_lp,double *X_hp,double *X) {
	int len_avg, N, U,N2,i;

	len_avg = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;
	N = 2 * len_cD;
	U = 2;

	upsamp2(cA, len_cA, U, cA_up);

	per_ext(cA_up, 2 * len_cA, len_avg / 2, temp);

	N2 = 2 * len_cA + len_avg;

	if (wt->wave->lpr_len == wt->wave->hpr_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
		wt->cobj = conv_init(N2, len_avg);
		wt->cfftset = 1;
	}
	else if (!(wt->wave->lpr_len == wt->wave->hpr_len)) {
		printf("Decomposition Filters must have the same length.");
		exit(-1);
	}

	wconv(wt, temp, N2, wt->wave->lpr, len_avg, X_lp);

	upsamp2(cD, len_cD, U, cA_up);

	per_ext(cA_up, 2 * len_cD, len_avg / 2, temp);

	N2 = 2 * len_cD + len_avg;

	wconv(wt, temp, N2, wt->wave->hpr, len_avg, X_hp);


	for (i = len_avg - 1; i < N + len_avg - 1; ++i) {
		X[i - len_avg + 1] = X_lp[i] + X_hp[i];
	}

	if (wt->wave->lpr_len == wt->wave->hpr_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
		free_conv(wt->cobj);
		wt->cfftset = 0;
	}

}

static void idwt_per(wt_object wt, double *cA, int len_cA, double *cD, int len_cD,  double *X) {
	int len_avg,i,l,m,n,t,l2;

	len_avg = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;
	l2 = len_avg / 2;
	m = -2;
	n = -1;

	for (i = 0; i < len_cA + l2 - 1; ++i) {
		m += 2;
		n += 2;
		X[m] = 0.0;
		X[n] = 0.0;
		for (l = 0; l < l2; ++l) {
			t = 2 * l;
			if ((i - l) >= 0 && (i - l) < len_cA) {
				X[m] += wt->wave->lpr[t] * cA[i - l] + wt->wave->hpr[t] * cD[i - l];
				X[n] += wt->wave->lpr[t + 1] * cA[i - l] + wt->wave->hpr[t + 1] * cD[i - l];
			}
			else if ((i - l) >= len_cA && (i-l) < len_cA + len_avg - 1) {
				X[m] += wt->wave->lpr[t] * cA[i - l - len_cA] + wt->wave->hpr[t] * cD[i - l - len_cA];
				X[n] += wt->wave->lpr[t + 1] * cA[i - l - len_cA] + wt->wave->hpr[t + 1] * cD[i - l - len_cA];
			}
			else if ((i - l) < 0 && (i-l) > -l2) {
				X[m] += wt->wave->lpr[t] * cA[len_cA + i - l] + wt->wave->hpr[t] * cD[len_cA + i - l];
				X[n] += wt->wave->lpr[t + 1] * cA[len_cA + i - l] + wt->wave->hpr[t + 1] * cD[len_cA + i - l];
			}
		}
	}
}

static void idwt_sym(wt_object wt, double *cA, int len_cA, double *cD, int len_cD, double *X) {
	int len_avg, i, l, m, n, t, v;

	len_avg = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;
	m = -2;
	n = -1;

	for (v = 0; v < len_cA; ++v) {
		i = v;
		m += 2;
		n += 2;
		X[m] = 0.0;
		X[n] = 0.0;
		for (l = 0; l < len_avg / 2; ++l) {
			t = 2 * l;
			if ((i - l) >= 0 && (i - l) < len_cA) {
				X[m] += wt->wave->lpr[t] * cA[i - l] + wt->wave->hpr[t] * cD[i - l];
				X[n] += wt->wave->lpr[t + 1] * cA[i - l] + wt->wave->hpr[t + 1] * cD[i - l];
			}
		}
	}
}


void idwt(wt_object wt, double *dwtop) {
	int J,U,i,lf,N,N2,iter,k;
	int app_len, det_len;
	double *cA_up, *X_lp, *X_hp,*out,*temp;

	J = wt->J;
	U = 2;
	app_len = wt->length[0];
	out = (double*)malloc(sizeof(double)* (wt->siglength + 1));
	if (!strcmp(wt->ext, "per") && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
		app_len = wt->length[0];
		det_len = wt->length[1];
		N = 2 * wt->length[J];
		lf = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;

		cA_up = (double*)malloc(sizeof(double)* N);
		temp = (double*)malloc(sizeof(double)* (N + lf));
		X_lp = (double*)malloc(sizeof(double)* (N + 2 * lf - 1));
		X_hp = (double*)malloc(sizeof(double)* (N + 2 * lf - 1));
		iter = app_len;

		for (i = 0; i < app_len; ++i) {
			out[i] = wt->output[i];
		}

		for (i = 0; i < J; ++i) {

			idwt1(wt,temp,cA_up,out,det_len,wt->output+iter,det_len,X_lp,X_hp,out);
			/*
			idwt_per(wt,out, det_len, wt->output + iter, det_len, X_lp);
			for (k = lf/2 - 1; k < 2 * det_len + lf/2 - 1; ++k) {
				out[k - lf/2 + 1] = X_lp[k];
			}
			*/
			iter += det_len;
			det_len = wt->length[i + 2];
		}
		free(cA_up);
		free(X_lp);
		free(X_hp);
		free(temp);

	}
	else if (!strcmp(wt->ext, "per") && !strcmp(wt->cmethod, "direct")) {
		app_len = wt->length[0];
		det_len = wt->length[1];
		N = 2 * wt->length[J];
		lf = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;

		X_lp = (double*)malloc(sizeof(double)* (N + 2 * lf - 1));
		iter = app_len;

		for (i = 0; i < app_len; ++i) {
			out[i] = wt->output[i];
		}

		for (i = 0; i < J; ++i) {

			//idwt1(wt, temp, cA_up, out, det_len, wt->output + iter, det_len, X_lp, X_hp, out);

			idwt_per(wt,out, det_len, wt->output + iter, det_len, X_lp);
			for (k = lf/2 - 1; k < 2 * det_len + lf/2 - 1; ++k) {
			out[k - lf/2 + 1] = X_lp[k];
			}

			iter += det_len;
			det_len = wt->length[i + 2];
		}

		free(X_lp);

	}
	else if (!strcmp(wt->ext, "sym") && !strcmp(wt->cmethod, "direct")) {
		app_len = wt->length[0];
		det_len = wt->length[1];
		N = 2 * wt->length[J] - 1;
		lf = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;

		X_lp = (double*)malloc(sizeof(double)* (N + 2 * lf - 1));
		iter = app_len;

		for (i = 0; i < app_len; ++i) {
			out[i] = wt->output[i];
		}

		for (i = 0; i < J; ++i) {

			//idwt1(wt, temp, cA_up, out, det_len, wt->output + iter, det_len, X_lp, X_hp, out);

			idwt_sym(wt, out, det_len, wt->output + iter, det_len, X_lp);
			for (k = lf-2; k < 2 * det_len; ++k) {
				out[k - lf + 2] = X_lp[k];
			}

			iter += det_len;
			det_len = wt->length[i + 2];
		}

		free(X_lp);

	}
	else if (!strcmp(wt->ext, "sym") && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
		lf = wt->wave->lpd_len;// lpd and hpd have the same length

		N = 2 * wt->length[J] - 1;
		cA_up = (double*)malloc(sizeof(double)* N);
		X_lp = (double*)malloc(sizeof(double)* (N + lf - 1));
		X_hp = (double*)malloc(sizeof(double)* (N + lf - 1));

		for (i = 0; i < app_len; ++i) {
			out[i] = wt->output[i];
		}

		iter = app_len;

		for (i = 0; i < J; ++i) {
			det_len = wt->length[i + 1];
			upsamp(out, det_len, U, cA_up);
			N2 = 2 * wt->length[i + 1] - 1;

			if (wt->wave->lpr_len == wt->wave->hpr_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
				wt->cobj = conv_init(N2, lf);
				wt->cfftset = 1;
			}
			else if (!(wt->wave->lpr_len == wt->wave->hpr_len)) {
				printf("Decomposition Filters must have the same length.");
				exit(-1);
			}

			wconv(wt, cA_up, N2, wt->wave->lpr, lf, X_lp);

			upsamp(wt->output + iter, det_len, U, cA_up);

			wconv(wt, cA_up, N2, wt->wave->hpr, lf, X_hp);

			for (k = lf - 2; k < N2 + 1; ++k) {
				out[k - lf + 2] = X_lp[k] + X_hp[k];
			}
			iter += det_len;
			if (wt->wave->lpr_len == wt->wave->hpr_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
				free_conv(wt->cobj);
				wt->cfftset = 0;
			}
		}

		free(cA_up);
		free(X_lp);
		free(X_hp);
	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}

	for (i = 0; i < wt->siglength; ++i) {
		dwtop[i] = out[i];
	}


	free(out);

}

static void idwpt_per(wpt_object wt, double *cA, int len_cA, double *cD, int len_cD, double *X) {
	int len_avg, i, l, m, n, t, l2;

	len_avg = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;
	l2 = len_avg / 2;
	m = -2;
	n = -1;

	for (i = 0; i < len_cA + l2 - 1; ++i) {
		m += 2;
		n += 2;
		X[m] = 0.0;
		X[n] = 0.0;
		for (l = 0; l < l2; ++l) {
			t = 2 * l;
			if ((i - l) >= 0 && (i - l) < len_cA) {
				X[m] += wt->wave->lpr[t] * cA[i - l] + wt->wave->hpr[t] * cD[i - l];
				X[n] += wt->wave->lpr[t + 1] * cA[i - l] + wt->wave->hpr[t + 1] * cD[i - l];
			}
			else if ((i - l) >= len_cA && (i - l) < len_cA + len_avg - 1) {
				X[m] += wt->wave->lpr[t] * cA[i - l - len_cA] + wt->wave->hpr[t] * cD[i - l - len_cA];
				X[n] += wt->wave->lpr[t + 1] * cA[i - l - len_cA] + wt->wave->hpr[t + 1] * cD[i - l - len_cA];
			}
			else if ((i - l) < 0 && (i - l) > -l2) {
				X[m] += wt->wave->lpr[t] * cA[len_cA + i - l] + wt->wave->hpr[t] * cD[len_cA + i - l];
				X[n] += wt->wave->lpr[t + 1] * cA[len_cA + i - l] + wt->wave->hpr[t + 1] * cD[len_cA + i - l];
			}
		}
	}
}

static void idwpt_sym(wpt_object wt, double *cA, int len_cA, double *cD, int len_cD, double *X) {
	int len_avg, i, l, m, n, t, v;

	len_avg = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;
	m = -2;
	n = -1;

	for (v = 0; v < len_cA; ++v) {
		i = v;
		m += 2;
		n += 2;
		X[m] = 0.0;
		X[n] = 0.0;
		for (l = 0; l < len_avg / 2; ++l) {
			t = 2 * l;
			if ((i - l) >= 0 && (i - l) < len_cA) {
				X[m] += wt->wave->lpr[t] * cA[i - l] + wt->wave->hpr[t] * cD[i - l];
				X[n] += wt->wave->lpr[t + 1] * cA[i - l] + wt->wave->hpr[t + 1] * cD[i - l];
			}
		}
	}
}

void idwpt(wpt_object wt, double *dwtop) {
	int J, U, i, lf, N, k,p,l;
	int app_len, det_len, index, n1, llb, index2, index3, index4,indexp,xlen;
	double *X_lp, *X,  *out, *out2;
	int *prep,*ptemp;

	J = wt->J;
	U = 2;
	app_len = wt->length[0];
	p = ipow2(J);
	lf = (wt->wave->lpr_len + wt->wave->hpr_len) / 2;
	xlen = p * (app_len + 2 * lf);

	X_lp = (double*)malloc(sizeof(double)* 2 * (wt->length[J] + lf));
	X = (double*)malloc(sizeof(double)* xlen);
	out = (double*)malloc(sizeof(double)* wt->length[J]);
	out2 = (double*)malloc(sizeof(double)* wt->length[J]);
	prep = (int*)malloc(sizeof(int)* p);
	ptemp = (int*)malloc(sizeof(int)* p);
	n1 = 1;
	llb = 1;
	index2 = xlen / p;
	indexp = 0;
	if (wt->basisvector[0] == 1) {
		for (i = 0; i < wt->siglength; ++i) {
			dwtop[i] = wt->output[i];
		}

	}
	else {
		for (i = 0; i < J; ++i) {
			llb *= 2;
			n1 += llb;
		}

		for (i = 0; i < xlen; ++i) {
			X[i] = 0.0;
		}

		for (i = 0; i < llb; ++i) {
			prep[i] = (int)wt->basisvector[n1 - llb + i];
			ptemp[i] = 0;
		}

		if (!strcmp(wt->ext, "per")) {
			app_len = wt->length[0];
			det_len = wt->length[1];
			index = 0;


			for (i = 0; i < J; ++i) {
				p = ipow2(J - i - 1);
				det_len = wt->length[i + 1];
				index2 *= 2;
				index3 = 0;
				index4 = 0;
				//idwt1(wt, temp, cA_up, out, det_len, wt->output + iter, det_len, X_lp, X_hp, out);
				n1 -= llb;
				for (l = 0; l < llb; ++l) {
					if (ptemp[l] != 2) {
						prep[l] = (int)wt->basisvector[n1 + l];
					}
					else {
						prep[l] = ptemp[l];
					}
					ptemp[l] = 0;
				}


				for (l = 0; l < p; ++l) {
					if (prep[2 * l] == 1 && prep[2 * l + 1] == 1) {
						for (k = 0; k < det_len; ++k) {
							out[k] = wt->output[index + k];
							out2[k] = wt->output[index + det_len + k];
						}
						idwpt_per(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf / 2 - 1; k < 2 * det_len + lf / 2 - 1; ++k) {
							X[index3 + k - lf / 2 + 1] = X_lp[k];
						}
						index += 2 * det_len;
						index3 += index2;
						index4 += 2 * indexp;
						ptemp[l] = 2;
					}
					else if (prep[2 * l] == 1 && prep[2 * l + 1] == 2) {
						index4 += indexp;
						for (k = 0; k < det_len; ++k) {
							out[k] = wt->output[index + k];
							out2[k] = X[index4 + k];
						}
						idwpt_per(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf / 2 - 1; k < 2 * det_len + lf / 2 - 1; ++k) {
							X[index3 + k - lf / 2 + 1] = X_lp[k];
						}
						index += det_len;
						index3 += index2;
						index4 += indexp;
						ptemp[l] = 2;
					}
					else if (prep[2 * l] == 2 && prep[2 * l + 1] == 1) {
						for (k = 0; k < det_len; ++k) {
							out[k] = X[index4 + k];
							out2[k] = wt->output[index + k];
						}
						idwpt_per(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf / 2 - 1; k < 2 * det_len + lf / 2 - 1; ++k) {
							X[index3 + k - lf / 2 + 1] = X_lp[k];
						}
						index += det_len;
						index3 += index2;
						index4 += 2 * indexp;
						ptemp[l] = 2;
					}
					else if (prep[2 * l] == 2 && prep[2 * l + 1] == 2) {
						for (k = 0; k < det_len; ++k) {
							out[k] = X[index4 + k];
							out2[k] = X[index4 + indexp + k];
						}
						idwpt_per(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf / 2 - 1; k < 2 * det_len + lf / 2 - 1; ++k) {
							X[index3 + k - lf / 2 + 1] = X_lp[k];
						}
						index4 += 2 * indexp;
						index3 += index2;
						ptemp[l] = 2;
					}
					else {
						index3 += index2;
						index4 += 2 * indexp;
					}

				}


				/*
				idwt_per(wt, out, det_len, wt->output + iter, det_len, X_lp);
				for (k = lf / 2 - 1; k < 2 * det_len + lf / 2 - 1; ++k) {
				out[k - lf / 2 + 1] = X_lp[k];
				}

				iter += det_len;
				det_len = wt->length[i + 2];
				*/
				llb /= 2;
				indexp = index2;
			}

			//free(X_lp);

		}
		else if (!strcmp(wt->ext, "sym")) {
			app_len = wt->length[0];
			det_len = wt->length[1];
			N = 2 * wt->length[J] - 1;

			//X_lp = (double*)malloc(sizeof(double)* (N + 2 * lf - 1));
			index = 0;

			for (i = 0; i < J; ++i) {
				p = ipow2(J - i - 1);
				det_len = wt->length[i + 1];
				index2 *= 2;
				index3 = 0;
				index4 = 0;
				//idwt1(wt, temp, cA_up, out, det_len, wt->output + iter, det_len, X_lp, X_hp, out);
				n1 -= llb;
				for (l = 0; l < llb; ++l) {
					if (ptemp[l] != 2) {
						prep[l] = (int)wt->basisvector[n1 + l];
					}
					else {
						prep[l] = ptemp[l];
					}
					ptemp[l] = 0;
				}


				for (l = 0; l < p; ++l) {
					if (prep[2 * l] == 1 && prep[2 * l + 1] == 1) {
						for (k = 0; k < det_len; ++k) {
							out[k] = wt->output[index + k];
							out2[k] = wt->output[index + det_len + k];
						}
						idwpt_sym(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf - 2; k < 2 * det_len; ++k) {
							X[index3 + k - lf + 2] = X_lp[k];
						}
						index += 2 * det_len;
						index3 += index2;
						index4 += 2 * indexp;
						ptemp[l] = 2;
					}
					else if (prep[2 * l] == 1 && prep[2 * l + 1] == 2) {
						index4 += indexp;
						for (k = 0; k < det_len; ++k) {
							out[k] = wt->output[index + k];
							out2[k] = X[index4 + k];
						}
						idwpt_sym(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf - 2; k < 2 * det_len; ++k) {
							X[index3 + k - lf + 2] = X_lp[k];
						}
						index += det_len;
						index3 += index2;
						index4 += indexp;
						ptemp[l] = 2;
					}
					else if (prep[2 * l] == 2 && prep[2 * l + 1] == 1) {
						for (k = 0; k < det_len; ++k) {
							out[k] = X[index4 + k];
							out2[k] = wt->output[index + k];
						}
						idwpt_sym(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf - 2; k < 2 * det_len; ++k) {
							X[index3 + k - lf + 2] = X_lp[k];
						}
						index += det_len;
						index3 += index2;
						index4 += 2 * indexp;
						ptemp[l] = 2;
					}
					else if (prep[2 * l] == 2 && prep[2 * l + 1] == 2) {
						for (k = 0; k < det_len; ++k) {
							out[k] = X[index4 + k];
							out2[k] = X[index4 + indexp + k];
						}
						idwpt_sym(wt, out, det_len, out2, det_len, X_lp);
						for (k = lf - 2; k < 2 * det_len; ++k) {
							X[index3 + k - lf + 2] = X_lp[k];
						}
						index4 += 2 * indexp;
						index3 += index2;
						ptemp[l] = 2;
					}
					else {
						index3 += index2;
						index4 += 2 * indexp;
					}

				}

				//idwt1(wt, temp, cA_up, out, det_len, wt->output + iter, det_len, X_lp, X_hp, out);
				/*
				idwpt_sym(wt, out, det_len, wt->output + iter, det_len, X_lp);
				for (k = lf - 2; k < 2 * det_len; ++k) {
				out[k - lf + 2] = X_lp[k];
				}

				iter += det_len;
				det_len = wt->length[i + 2];
				*/
				llb /= 2;
				indexp = index2;
			}

			//free(X_lp);

		}
		else {
			printf("Signal extension can be either per or sym");
			exit(-1);
		}

		for (i = 0; i < wt->siglength; ++i) {
			//printf("%g ", X[i]);
			dwtop[i] = X[i];
		}

	}


	free(out);
	free(X_lp);
	free(X);
	free(out2);
	free(prep);
	free(ptemp);
}


static void swt_per(wt_object wt,int M, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int l, l2, isodd, i, t, len_avg,j;

	len_avg = M * wt->wave->lpd_len;
	l2 = len_avg / 2;
	isodd = N % 2;

	for (i = 0; i < len_cA; ++i) {
		t = i + l2;
		cA[i] = 0.0;
		cD[i] = 0.0;
		l = -1;
		for (j = 0; j < len_avg; j+=M) {
			l++;
			while (j >= len_cA) {
				j -= len_cA;
			}
			if ((t - j) >= l2 && (t -j) < N) {
				cA[i] += wt->wave->lpd[l] * inp[t - j];
				cD[i] += wt->wave->hpd[l] * inp[t - j];
			}
			else if ((t - j) < l2 && (t - j) >= 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - j];
				cD[i] += wt->wave->hpd[l] * inp[t - j];
			}
			else if ((t - j) < 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - j + N];
				cD[i] += wt->wave->hpd[l] * inp[t - j + N];
			}
			else if ((t - j) >= N && isodd == 0) {
				cA[i] += wt->wave->lpd[l] * inp[t - j - N];
				cD[i] += wt->wave->hpd[l] * inp[t - j - N];
			}
			else if ((t - j) >= N && isodd == 1) {
				if (t - l != N) {
					cA[i] += wt->wave->lpd[l] * inp[t - j - (N + 1)];
					cD[i] += wt->wave->hpd[l] * inp[t - j - (N + 1)];
				}
				else {
					cA[i] += wt->wave->lpd[l] * inp[N - 1];
					cD[i] += wt->wave->hpd[l] * inp[N - 1];
				}
			}

		}
	}


}

static void swt_fft(wt_object wt, double *inp) {
	int i, J, temp_len, iter, M, N, len_filt;
	int lenacc;
	double *low_pass, *high_pass,*sig,*cA,*cD;

	temp_len = wt->siglength;
	J = wt->J;
	wt->length[0] = wt->length[J] = temp_len;
	wt->outlength = wt->length[J+1] = (J + 1) * temp_len;
	M = 1;
	for (iter = 1; iter < J; ++iter) {
		M = 2 * M;
		wt->length[iter] = temp_len;
	}

	len_filt = wt->wave->filtlength;

	low_pass = (double*)malloc(sizeof(double)* M * len_filt);
	high_pass = (double*)malloc(sizeof(double)* M * len_filt);
	sig = (double*)malloc(sizeof(double)* (M * len_filt + temp_len + (temp_len%2)));
	cA = (double*)malloc(sizeof(double)* (2 * M * len_filt + temp_len + (temp_len % 2)) - 1);
	cD = (double*)malloc(sizeof(double)* (2 * M * len_filt + temp_len + (temp_len % 2)) - 1);

	M = 1;

	for (i = 0; i < temp_len; ++i) {
		wt->params[i] = inp[i];
	}

	lenacc = wt->outlength;

	for (iter = 0; iter < J; ++iter) {
		lenacc -= temp_len;
		if (iter > 0) {
			M = 2 * M;
			N = M * len_filt;
			upsamp2(wt->wave->lpd, wt->wave->lpd_len, M, low_pass);
			upsamp2(wt->wave->hpd, wt->wave->hpd_len, M, high_pass);
		}
		else {
			N = len_filt;
			for (i = 0; i < N; ++i) {
				low_pass[i] = wt->wave->lpd[i];
				high_pass[i] = wt->wave->hpd[i];
			}
		}

		//swt_per(wt,M, wt->params, temp_len, cA, temp_len, cD,temp_len);

		per_ext(wt->params, temp_len, N / 2, sig);

		if (wt->wave->lpd_len == wt->wave->hpd_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
			wt->cobj = conv_init(N + temp_len + (temp_len % 2), N);
			wt->cfftset = 1;
		}
		else if (!(wt->wave->lpd_len == wt->wave->hpd_len)) {
			printf("Decomposition Filters must have the same length.");
			exit(-1);
		}


		wconv(wt, sig, N + temp_len + (temp_len % 2), low_pass, N, cA);

		wconv(wt, sig, N + temp_len + (temp_len % 2), high_pass, N, cD);

		if (wt->wave->lpd_len == wt->wave->hpd_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
			free_conv(wt->cobj);
			wt->cfftset = 0;
		}

		for (i = 0; i < temp_len; ++i) {
			wt->params[i] = cA[N + i];
			wt->params[lenacc + i] = cD[N + i];
		}


	}

	free(low_pass);
	free(high_pass);
	free(sig);
	free(cA);
	free(cD);
}

static void swt_direct(wt_object wt, double *inp) {
	int i, J, temp_len, iter, M, N;
	int lenacc, len_filt;
	double  *cA, *cD;

	temp_len = wt->siglength;
	J = wt->J;
	wt->length[0] = wt->length[J] = temp_len;
	wt->outlength = wt->length[J + 1] = (J + 1) * temp_len;
	len_filt = wt->wave->filtlength;
	M = 1;
	for (iter = 1; iter < J; ++iter) {
		M = 2 * M;
		wt->length[iter] = temp_len;
	}


	cA = (double*)malloc(sizeof(double)* temp_len);
	cD = (double*)malloc(sizeof(double)* temp_len);

	M = 1;

	for (i = 0; i < temp_len; ++i) {
		wt->params[i] = inp[i];
	}

	lenacc = wt->outlength;

	for (iter = 0; iter < J; ++iter) {
		lenacc -= temp_len;
		if (iter > 0) {
			M = 2 * M;
			N = M * len_filt;
		}
		else {
			N = len_filt;
		}

		swt_per(wt, M, wt->params, temp_len, cA, temp_len, cD, temp_len);


		for (i = 0; i < temp_len; ++i) {
			wt->params[i] = cA[i];
			wt->params[lenacc + i] = cD[i];
		}

	}

	free(cA);
	free(cD);

}


void swt(wt_object wt, double *inp) {
	if (!strcmp(wt->method, "swt") && !strcmp(wt->cmethod, "direct") ) {
		swt_direct(wt,inp);
	}
	else if (!strcmp(wt->method, "swt") &&  (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
		swt_fft(wt, inp);
	}
	else {
		printf("SWT Only accepts two methods - direct and fft");
		exit(-1);
	}
}

void iswt(wt_object wt, double *swtop) {
	int N, lf, iter,i,J,index,value,count,len;
	int index_shift,len0,U,N1,index2;
	double *appx1, *det1,*appx_sig,*det_sig,*cL0,*cH0,*tempx,*oup00L,*oup00H,*oup00,*oup01,*appx2,*det2;

	N = wt->siglength;
	J = wt->J;
	U = 2;
	lf = wt->wave->lpr_len;

	appx_sig = (double*)malloc(sizeof(double)* N);
	det_sig = (double*)malloc(sizeof(double)* N);
	appx1 = (double*)malloc(sizeof(double)* N);
	det1 = (double*)malloc(sizeof(double)* N);
	appx2 = (double*)malloc(sizeof(double)* N);
	det2 = (double*)malloc(sizeof(double)* N);
	tempx = (double*)malloc(sizeof(double)* N);
	cL0 = (double*)malloc(sizeof(double)* (N + (N%2) + lf));
	cH0 = (double*)malloc(sizeof(double)* (N + (N % 2) + lf));
	oup00L = (double*)malloc(sizeof(double)* (N + 2 * lf));
	oup00H = (double*)malloc(sizeof(double)* (N + 2 * lf));
	oup00 = (double*)malloc(sizeof(double)* N);
	oup01 = (double*)malloc(sizeof(double)* N);



	for (iter = 0; iter < J; ++iter) {
		for (i = 0; i < N; ++i) {
			swtop[i] = 0.0;
		}
		if (iter == 0) {
			for (i = 0; i < N; ++i) {
				appx_sig[i] = wt->output[i];
				det_sig[i] = wt->output[N + i];
			}
		}
		else {
			for (i = 0; i < N; ++i) {
				det_sig[i] = wt->output[(iter + 1) * N + i];
			}
		}

		value = (int)pow(2.0, (double) (J - 1 - iter));

		for (count = 0; count < value; count++) {
			len = 0;
			for (index = count; index < N; index += value) {
				appx1[len] = appx_sig[index];
				det1[len] = det_sig[index];
				len++;
			}


			//SHIFT 0
			len0 = 0;

			for (index_shift = 0; index_shift < len; index_shift += 2) {
				appx2[len0] = appx1[index_shift];
				det2[len0] = det1[index_shift];
				len0++;
			}
			upsamp2(appx2, len0, U, tempx);
			per_ext(tempx, 2 * len0, lf / 2, cL0);

			upsamp2(det2, len0, U, tempx);
			per_ext(tempx, 2 * len0, lf / 2, cH0);

			N1 = 2 * len0 + lf;

			if (wt->wave->lpr_len == wt->wave->hpr_len && (!strcmp(wt->cmethod, "fft") || !strcmp(wt->cmethod, "FFT"))) {
				wt->cobj = conv_init(N1, lf);
				wt->cfftset = 1;
			}
			else if (!(wt->wave->lpd_len == wt->wave->hpd_len)) {
				printf("Decomposition Filters must have the same length.");
				exit(-1);
			}

			wconv(wt, cL0, N1, wt->wave->lpr, lf, oup00L);

			wconv(wt, cH0, N1, wt->wave->hpr, lf, oup00H);

			for (i = lf - 1; i < 2 * len0 + lf - 1; ++i) {
				oup00[i - lf + 1] = oup00L[i] + oup00H[i];
			}

			//SHIFT 1

			len0 = 0;

			for (index_shift = 1; index_shift < len; index_shift += 2) {
				appx2[len0] = appx1[index_shift];
				det2[len0] = det1[index_shift];
				len0++;
			}

			upsamp2(appx2, len0, U, tempx);
			per_ext(tempx, 2 * len0, lf / 2, cL0);

			upsamp2(det2, len0, U, tempx);
			per_ext(tempx, 2 * len0, lf / 2, cH0);

			N1 = 2 * len0 + lf;

			wconv(wt, cL0, N1, wt->wave->lpr, lf, oup00L);

			wconv(wt, cH0, N1, wt->wave->hpr, lf, oup00H);

			for (i = lf - 1; i < 2 * len0 + lf - 1; ++i) {
				oup01[i - lf + 1] = oup00L[i] + oup00H[i];
			}

			circshift(oup01, 2*len0, -1);

			index2 = 0;

			for (index = count; index < N; index += value) {
				swtop[index] = (oup00[index2] + oup01[index2]) / 2.0;
				index2++;
			}

		}
		for (i = 0; i < N; ++i) {
			appx_sig[i] = swtop[i];
		}

	}



	free(appx_sig);
	free(det_sig);
	free(appx1);
	free(det1);
	free(tempx);
	free(cL0);
	free(cH0);
	free(oup00L);
	free(oup00H);
	free(oup00);
	free(oup01);
	free(appx2);
	free(det2);
}

static void modwt_per(wt_object wt, int M, double *inp, int N, double *cA, int len_cA, double *cD, int len_cD) {
	int l, i, t, len_avg;
	double s;
	double *filt;
	len_avg = wt->wave->lpd_len;

	filt = (double*)malloc(sizeof(double)* 2 * len_avg);
	s = sqrt(2.0);
	for (i = 0; i < len_avg; ++i) {
		filt[i] = wt->wave->lpd[i] / s;
		filt[len_avg + i] = wt->wave->hpd[i] / s;
	}

	for (i = 0; i < len_cA; ++i) {
		t = i;
		cA[i] = filt[0] * inp[t];
		cD[i] = filt[len_avg] * inp[t];
		for (l = 1; l < len_avg; l++) {
			t -= M;
			while (t >= len_cA) {
				t -= len_cA;
			}
			while (t < 0) {
				t += len_cA;
			}

			cA[i] += filt[l] * inp[t];
			cD[i] += filt[len_avg + l] * inp[t];

		}
	}
	free(filt);
}

void modwt(wt_object wt, double *inp) {
	int i, J, temp_len, iter, M, N;
	int lenacc, len_filt;
	double  *cA, *cD;

	temp_len = wt->siglength;
	J = wt->J;
	wt->length[0] = wt->length[J] = temp_len;
	wt->outlength = wt->length[J + 1] = (J + 1) * temp_len;
	len_filt = wt->wave->filtlength;
	M = 1;
	for (iter = 1; iter < J; ++iter) {
		M = 2 * M;
		wt->length[iter] = temp_len;
	}


	cA = (double*)malloc(sizeof(double)* temp_len);
	cD = (double*)malloc(sizeof(double)* temp_len);

	M = 1;

	for (i = 0; i < temp_len; ++i) {
		wt->params[i] = inp[i];
	}

	lenacc = wt->outlength;

	for (iter = 0; iter < J; ++iter) {
		lenacc -= temp_len;
		if (iter > 0) {
			M = 2 * M;
			N = M * len_filt;
		}
		else {
			N = len_filt;
		}

		modwt_per(wt, M, wt->params, temp_len, cA, temp_len, cD, temp_len);


		for (i = 0; i < temp_len; ++i) {
			wt->params[i] = cA[i];
			wt->params[lenacc + i] = cD[i];
		}

	}

	free(cA);
	free(cD);

}

static void imodwt_per(wt_object wt,int M, double *cA, int len_cA, double *cD, int len_cD, double *X) {
	int len_avg, i, l, t;
	double s;
	double *filt;
	len_avg = wt->wave->lpd_len;

	filt = (double*)malloc(sizeof(double)* 2 * len_avg);
	s = sqrt(2.0);
	for (i = 0; i < len_avg; ++i) {
		filt[i] = wt->wave->lpd[i] / s;
		filt[len_avg + i] = wt->wave->hpd[i] / s;
	}


	for (i = 0; i < len_cA; ++i) {
		t = i;
		X[i] = (filt[0] * cA[t]) + (filt[len_avg] * cD[t]);
		for (l = 1; l < len_avg; l++) {
			t += M;
			while (t >= len_cA) {
				t -= len_cA;
			}
			while (t < 0) {
				t += len_cA;
			}

			X[i] += (filt[l] * cA[t]) + (filt[len_avg + l] * cD[t]);

		}
	}
	free(filt);
}

void imodwt(wt_object wt, double *dwtop) {
	int N, lf, iter, i, J, j, U;
	int lenacc,M;
	double *X;

	N = wt->siglength;
	J = wt->J;
	U = 2;
	lf = wt->wave->lpr_len;
	lenacc = N;
	M = (int)pow(2.0, (double)J - 1.0);
	//M = 1;
	X = (double*)malloc(sizeof(double)* N);

	for (i = 0; i < N; ++i) {
		dwtop[i] = wt->output[i];
	}

	for (iter = 0; iter < J; ++iter) {
		if (iter > 0) {
			M = M / 2;
		}
		imodwt_per(wt, M, dwtop, N, wt->params + lenacc, N, X);
		/*
		for (j = lf - 1; j < N; ++j) {
			dwtop[j - lf + 1] = X[j];
		}
		for (j = 0; j < lf - 1; ++j) {
			dwtop[N - lf + 1 + j] = X[j];
		}
		*/
		for (j = 0; j < N; ++j) {
			dwtop[j] = X[j];
		}

		lenacc += N;
	}
	free(X);
}

void setDWTExtension(wt_object wt, char *extension) {
	if (!strcmp(extension, "sym")) {
		strcpy(wt->ext, "sym");
	}
	else if (!strcmp(extension, "per")) {
		strcpy(wt->ext, "per");
	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}
}

void setWTREEExtension(wtree_object wt, char *extension) {
	if (!strcmp(extension, "sym")) {
		strcpy(wt->ext, "sym");
	}
	else if (!strcmp(extension, "per")) {
		strcpy(wt->ext, "per");
	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}
}

void setDWPTExtension(wpt_object wt, char *extension) {
	if (!strcmp(extension, "sym")) {
		strcpy(wt->ext, "sym");
	}
	else if (!strcmp(extension, "per")) {
		strcpy(wt->ext, "per");
	}
	else {
		printf("Signal extension can be either per or sym");
		exit(-1);
	}
}

void setDWPTEntropy(wpt_object wt, char *entropy, double eparam) {
	if (!strcmp(entropy, "shannon")) {
		strcpy(wt->entropy, "shannon");
	}
	else if (!strcmp(entropy, "threshold")) {
		strcpy(wt->entropy, "threshold");
		wt ->eparam = eparam;
	}
	else if (!strcmp(entropy, "norm")) {
		strcpy(wt->entropy, "norm");
		wt->eparam = eparam;
	}
	else if (!strcmp(entropy, "logenergy") || !strcmp(entropy, "log energy") || !strcmp(entropy, "energy")) {
		strcpy(wt->entropy, "logenergy");
	}
	else {
		printf("Entropy should be one of shannon, threshold, norm or logenergy");
		exit(-1);
	}
}

void setWTConv(wt_object wt, char *cmethod) {
	if (!strcmp(cmethod, "fft") || !strcmp(cmethod, "FFT")) {
		strcpy(wt->cmethod, "fft");
	}
	else if (!strcmp(cmethod, "direct")) {
		strcpy(wt->cmethod, "direct");
	}
	else {
		printf("Convolution Only accepts two methods - direct and fft");
		exit(-1);
	}
}

void wave_summary(wave_object obj) {
	int i,N;
	N = obj->filtlength;
	printf("\n");
	printf("Wavelet Name : %s \n",obj->wname);
	printf("\n");
	printf("Wavelet Filters \n\n");
	printf("lpd : [");
	for (i = 0; i < N-1; ++i) {
		printf("%g,", obj->lpd[i]);
	}
	printf("%g", obj->lpd[N-1]);
	printf("] \n\n");
	printf("hpd : [");
	for (i = 0; i < N-1; ++i) {
		printf("%g,", obj->hpd[i]);
	}
	printf("%g", obj->hpd[N - 1]);
	printf("] \n\n");
	printf("lpr : [");
	for (i = 0; i < N-1; ++i) {
		printf("%g,", obj->lpr[i]);
	}
	printf("%g", obj->lpr[N - 1]);
	printf("] \n\n");
	printf("hpr : [");
	for (i = 0; i < N-1; ++i) {
		printf("%g,", obj->hpr[i]);
	}
	printf("%g", obj->hpr[N - 1]);
	printf("] \n\n");
}

void wt_summary(wt_object wt) {
	int i;
	int J,t;
	J = wt->J;
	wave_summary(wt->wave);
	printf("\n");
	printf("Wavelet Transform : %s \n", wt->method);
	printf("\n");
	printf("Signal Extension : %s \n", wt->ext);
	printf("\n");
	printf("Convolutional Method : %s \n", wt->cmethod);
	printf("\n");
	printf("Number of Decomposition Levels %d \n", wt->J);
	printf("\n");
	printf("Length of Input Signal %d \n", wt->siglength);
	printf("\n");
	printf("Length of WT Output Vector %d \n", wt->outlength);
	printf("\n");
	printf("Wavelet Coefficients are contained in vector : %s \n", "output");
	printf("\n");
	printf("Approximation Coefficients \n");
	printf("Level %d Access : output[%d] Length : %d \n", J, 0, wt->length[0]);
	printf("\n");
	printf("Detail Coefficients \n");
	t = wt->length[0];
	for (i = 0; i < J; ++i) {
		printf("Level %d Access : output[%d] Length : %d \n", J - i,t,wt->length[i+1]);
		t += wt->length[i+1];
	}
	printf("\n");

}

void wtree_summary(wtree_object wt) {
	int i,k,p2;
	int J,t;
	J = wt->J;
	wave_summary(wt->wave);
	printf("\n");
	printf("Wavelet Transform : %s \n", wt->method);
	printf("\n");
	printf("Signal Extension : %s \n", wt->ext);
	printf("\n");
	printf("Number of Decomposition Levels %d \n", wt->J);
	printf("\n");
	printf("Length of Input Signal %d \n", wt->siglength);
	printf("\n");
	printf("Length of WT Output Vector %d \n", wt->outlength);
	printf("\n");
	printf("Wavelet Coefficients are contained in vector : %s \n", "output");
	printf("\n");
	printf("Coefficients Access \n");
	t = 0;
	p2 = 2;
	for (i = 0; i < J; ++i) {
		for (k = 0; k < p2; ++k) {
			printf("Node %d %d Access : output[%d] Length : %d \n", i + 1, k, wt->nodelength[t], wt->length[J - i]);
			t++;
		}
		p2 *= 2;
	}
	printf("\n");

}

void wpt_summary(wpt_object wt) {
	int i, k, p2;
	int J, it1,it2;
	J = wt->J;
	wave_summary(wt->wave);
	printf("\n");
	printf("Signal Extension : %s \n", wt->ext);
	printf("\n");
	printf("Entropy : %s \n", wt->entropy);
	printf("\n");
	printf("Number of Decomposition Levels %d \n", wt->J);
	printf("\n");
	printf("Number of Active Nodes %d \n", wt->nodes);
	printf("\n");
	printf("Length of Input Signal %d \n", wt->siglength);
	printf("\n");
	printf("Length of WT Output Vector %d \n", wt->outlength);
	printf("\n");
	printf("Wavelet Coefficients are contained in vector : %s \n", "output");
	printf("\n");
	printf("Coefficients Access \n");
	it1 = 1;
	it2 = 0;
	for (i = 0; i < J; ++i) {
		it1 += ipow2(i + 1);
	}
	for (i = J; i > 0; --i) {
		p2 = ipow2(i);
		it1 -= p2;
		for (k = 0; k < p2; ++k) {
			if (wt->basisvector[it1 + k] == 1) {
				printf("Node %d %d Access : output[%d] Length : %d \n", i, k, it2, wt->length[J - i + 1]);
				it2 += wt->length[J - i + 1];
			}
		}
	}

	printf("\n");

}

void cwt_summary(cwt_object wt) {

	printf("\n");
	printf("Wavelet : %s Parameter %lf \n", wt->wave,wt->m);
	printf("\n");
	printf("Length of Input Signal : %d \n", wt->siglength);
	printf("\n");
	printf("Sampling Rate : %g \n", wt->dt);
	printf("\n");
	printf("Total Number of Scales : %d \n", wt->J);
	printf("\n");
	printf("Smallest Scale (s0) : %lf \n", wt->s0);
	printf("\n");
	printf("Separation Between Scales (dj) %lf \n", wt->dj);
	printf("\n");
	printf("Scale Type %s \n", wt->type);
	printf("\n");
	printf("Complex CWT Output Vector is of size %d * %d stored in Row Major format \n",wt->J,wt->siglength);
	printf("\n");
	printf("The ith real value can be accessed using wt->output[i].re and imaginary value by wt->output[i].im \n");
	printf("\n");

}

void wave_free(wave_object object) {
	free(object);
}

void wt_free(wt_object object) {
	free(object);
}

void wtree_free(wtree_object object) {
	free(object);
}

void wpt_free(wpt_object object) {
	free(object);
}

void cwt_free(cwt_object object) {
	free(object);
}
